Gene
| Gene Model ID | pfu_aug1.0_3527.1_08651 |
|---|---|
| Locus | scaffold3527.1 : 4009 ... 11815 : - |
| To GenomeBrowser | scaffold3527.1:4009..11815 |
| Genes list of scaffold | scaffold3527.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3527.1_08651.t1 | 3 | 1 | Glyco_transf_25 | 56 | 77 | 7.1e-06 | 25.8 | 0.5 | 3700.0 | -2.7 |
| pfu_aug1.0_3527.1_08651.t1 | 3 | 2 | Glyco_transf_25 | 91 | 100 | 7.1e-06 | 25.8 | 0.48 | 3600.0 | -2.7 |
| pfu_aug1.0_3527.1_08651.t1 | 3 | 3 | Glyco_transf_25 | 121 | 191 | 7.1e-06 | 25.8 | 2.5e-09 | 1.8e-05 | 24.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3527.1_08651.t1 | gi|297276457|ref|XP_001114885.2| | PREDICTED: procollagen galactosyltransferase 1-like [Macaca mulatta] | 4.0e-35 |
Transcript
| Transcript ID | pfu_aug1.0_3527.1_08651.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3527.1_08651.t1 atgacggacatgggattttataaacgatctgtcgactattttcaaatcttggacagagagaaaaaaggagttttcaaatg tgccatggtccacacagctgtgctgatagacctaagaaagcctgtcaccaaacggttttcctactcgcataaacctaaat cattcaatggaccaaccgatgatatcatcatatttgctcaaaatgtcaagaatgcaggaaagaagatgtatatattgaac acggagtactttggaatcgtaatgaacccgcttgaagatgatggaacattacacgatgaggaagatcgattcataaccat cagaagtgacgctatggtgttttggggtcgtaatgcatatacgatatacataatcaatttaaaaagacgaccagagagac ggaccagaatgttaaacatgctgaaaaatcatggtgtaaaggctaaagttacggaggccgtcgatggacaaacgctgaac acgacgtatctgaagaatttgggagtacgcatgttgcctggttacgtcgatcctcattggggaagatatttatgcaacat taagtcgttcaatgatattcaagaacgctttggacaatggctgaaacattcttttcgacgcgacctgtcatacaagacgg ccaccaatggctatgattttctcatgcattttcgacttctccgcaacgaccgctttaacatttttcaattattgctcgat attccattaaaccttacagaagaccaagcaagtatttaa |
|
Protein
| Protein ID | pfu_aug1.0_3527.1_08651.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3527.1_08651.t1 MTDMGFYKRSVDYFQILDREKKGVFKCAMVHTAVLIDLRKPVTKRFSYSHKPKSFNGPTDDIIIFAQNVKNAGKKMYILN TEYFGIVMNPLEDDGTLHDEEDRFITIRSDAMVFWGRNAYTIYIINLKRRPERRTRMLNMLKNHGVKAKVTEAVDGQTLN TTYLKNLGVRMLPGYVDPHWGRYLCNIKSFNDIQERFGQWLKHSFRRDLSYKTATNGYDFLMHFRLLRNDRFNIFQLLLD IPLNLTEDQASI |
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