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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_3527.1_08652
Locus scaffold3527.1 : 13370 ... 31765 : -
To GenomeBrowser scaffold3527.1:13370..31765
Genes list of scaffold scaffold3527.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_3527.1_08652.t1 1 1 Glyco_transf_25 302 432 1.8e-21 76.7 1.8e-23 8.9e-20 71.1

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_3527.1_08652.t1 gi|344283113|ref|XP_003413317.1| 0.0

Transcript
Transcript IDpfu_aug1.0_3527.1_08652.t1
Definition-
>pfu_aug1.0_3527.1_08652.t1
atgttgtgtgggaaacggttccactgtacaatagctagtgaaaaaggagtatttatatacatttttagtggtagcaattt
gtcggaaggaaagattataatttatgacaaaaaggggaatgtgatgcagtgtacattgataagaagtgaccataatgtgg
acaactcctcagtcatcctgaatgagtgggtaacggcagtgagagcagaataccatgacatagatttaaagatagatgac
tcagtaacagagtatgaaggagagaaaacaccctgtgactggacagatgagagatttaacaaagttattgctcttagaga
agaagcattagttacagcaagaaaaatttgggcagattacctatttggatattacaagagagtctctggctattttgacg
ttgtaaagagagagaagataggagtgtttgaatgtcccatggttcactctgctatactgatagacatgaggcacatcgtt
accgaacagttttcctactcacaaaagcctgctggatatgggggaccacatgatgatatcattatttttgcatattctgt
aaaagccacagataagagacttcgcaaaaaatgtccccatgcgaaaataaccctgctgtattcctacaaaggagagaaaa
tgcacgttataaacagtgaatactttgggataataatggttccattagatgatttcaacacgatagaggatgaagctgaa
cagtttgtctttgctaagttagaggccatgggatataaatatagtaaaatatccaatcttgagagggaactgaatacaac
atatctgaagaaacttggagtagagatgctgccaggttatgctgatccctacgtaggaagaattaacgttgatatttttg
gaaaatatgtcaatatacattgtaaaaataattctaaaattgaaaatgttattttcaggaaactaactatgggagagatt
ggatgttttctgagccattacttcatatggaaagatatattagagaaaggatataaaaaagtgattgtctttgaggatga
tgtaagatttgagccttacttcagaacacgaaccaagaatgtaatgaaagaagtagaagaaagagtaccagactgggaat
tattatatctaggaagaaagagaatgcgtcgggacttagaaaagtatgtagatggcacagagaacctagtgtggccgagt
tactcctactggactctgggatatgcactctcagataaaggtgccaagaaactaatagaccaggaaccgttagggaaaat
gatacccgtagacgagtacttacctatcatgtttaatcatcatccagagacttag

Protein
Protein IDpfu_aug1.0_3527.1_08652.t1
Definition-
>pfu_aug1.0_3527.1_08652.t1
MLCGKRFHCTIASEKGVFIYIFSGSNLSEGKIIIYDKKGNVMQCTLIRSDHNVDNSSVILNEWVTAVRAEYHDIDLKIDD
SVTEYEGEKTPCDWTDERFNKVIALREEALVTARKIWADYLFGYYKRVSGYFDVVKREKIGVFECPMVHSAILIDMRHIV
TEQFSYSQKPAGYGGPHDDIIIFAYSVKATDKRLRKKCPHAKITLLYSYKGEKMHVINSEYFGIIMVPLDDFNTIEDEAE
QFVFAKLEAMGYKYSKISNLERELNTTYLKKLGVEMLPGYADPYVGRINVDIFGKYVNIHCKNNSKIENVIFRKLTMGEI
GCFLSHYFIWKDILEKGYKKVIVFEDDVRFEPYFRTRTKNVMKEVEERVPDWELLYLGRKRMRRDLEKYVDGTENLVWPS
YSYWTLGYALSDKGAKKLIDQEPLGKMIPVDEYLPIMFNHHPET

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