Gene
| Gene Model ID | pfu_aug1.0_3527.1_08653 |
|---|---|
| Locus | scaffold3527.1 : 33786 ... 37235 : - |
| To GenomeBrowser | scaffold3527.1:33786..37235 |
| Genes list of scaffold | scaffold3527.1 |
| Synonym | pfu_aug2.0_15.1_16712 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3527.1_08653.t1 | 1 | 1 | Myb_DNA-bind_4 | 15 | 114 | 5.8e-06 | 26.3 | 2.9e-09 | 1.1e-05 | 25.5 |
| pfu_aug1.0_3527.1_08653.t1 | 1 | 1 | MADF_DNA_bdg | 22 | 112 | 9.1e-12 | 45.0 | 4.3e-15 | 1.6e-11 | 44.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3527.1_08653.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3527.1_08653.t1 atgtcgaggctgataaagaagcacaaagaaaatttacaactatccagtgaagaggtgactcgcttgatagaatggtacaa atcagaaccgtgtttgtgggacgtccatgtatcatctatttgttcaaaagaaaaaaggtcacagataatagaaaggatta gaagaaaacttatcacggagttcggaatagaatgtacagctgatcaggttaagggcaaactgacgtatctaaggggatat tactcaagagaactaatgaaggaaaataggtcaaaagctatgaatgctggagatgtcaaggtctactgcagtcaatggcc gttcttcaaggacttggatgagtttcttagggaccaaatcacgcctaggtctacctacatgtattccaacacgatggctg tcagcagtcactcagatgacgtcgtggtggaaatggacatagcagacgactcgtcaggtttgtcggtattttcaaacgaa gaccagacagaggctccacctaccaaaaggtcaaggtcgaatgtttctgatccagtgattgtacattatggaacagtcga gaaacatgatgaaagcgaagacgaggacgtcattttcggaaagtacgtgacgtcagaattgaagaaactcacaaatccac gcgagagagcactggcgaaatttagaattcaaaaacttttctttgaaatgcaatttggatcacaaccagaggaaacaaga acaaataaatgtcaaacagaaaaagtagaaaatggctga |
|
Protein
| Protein ID | pfu_aug1.0_3527.1_08653.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3527.1_08653.t1 MSRLIKKHKENLQLSSEEVTRLIEWYKSEPCLWDVHVSSICSKEKRSQIIERIRRKLITEFGIECTADQVKGKLTYLRGY YSRELMKENRSKAMNAGDVKVYCSQWPFFKDLDEFLRDQITPRSTYMYSNTMAVSSHSDDVVVEMDIADDSSGLSVFSNE DQTEAPPTKRSRSNVSDPVIVHYGTVEKHDESEDEDVIFGKYVTSELKKLTNPRERALAKFRIQKLFFEMQFGSQPEETR TNKCQTEKVENG |
|