Gene
| Gene Model ID | pfu_aug1.0_3529.1_52007 |
|---|---|
| Locus | scaffold3529.1 : 33428 ... 51215 : - |
| To GenomeBrowser | scaffold3529.1:33428..51215 |
| Genes list of scaffold | scaffold3529.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3529.1_52007.t1 | 3 | 1 | Dzip-like_N | 1 | 60 | 1.5e-14 | 53.8 | 2.0e-18 | 1.5e-14 | 53.8 |
| pfu_aug1.0_3529.1_52007.t1 | 3 | 2 | Dzip-like_N | 45 | 81 | 1.5e-14 | 53.8 | 0.72 | 5300.0 | -2.9 |
| pfu_aug1.0_3529.1_52007.t1 | 3 | 3 | Dzip-like_N | 170 | 193 | 1.5e-14 | 53.8 | 0.27 | 2000.0 | -1.5 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_3529.1_52007.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3529.1_52007.t1 atggttgatcccaactttataaagcttttcaagcttgcacaacttacgatagaatatttactgcactcacaagaatatct cactactgtagtcactggtatggaggaaaaaatcaagaaagaagaacagatacataacgttgaggcaaagatgtccgaga aaatgacaaagcaagaaaggatgtggcagaagaaaatggctcggctcaaacagaaagaagaagaaggaaaggtggtgcga gataggaaacaggaaatgacagaaatggaggaagttgaagaaatgcttcggcaagagtcagatgatcttgtactcttata caagtatctattcggcttatggacgtccttcaggagtggagaactaactctaaggactacacaatttttggaggaattac ggaaaaatcccacattaaaactgatgcgagatgaactgatatctttacttcaagacagcttggataagataggcataccg cctgagacccgaggaataccagataatatcttacacagcaagcttgccgtactgaagcagagaagacagactaccataca gggaagaaaagatgataaaaagccgactggagcaatagatgtcatgggatcaagtcctccaaagaaaaagatagaagttc tggatgactttaattcggacagtgaatgggatgtgtcaccattcgaggaagatcaaccagcaaaaactgctcccaagtag |
|
Protein
| Protein ID | pfu_aug1.0_3529.1_52007.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3529.1_52007.t1 MVDPNFIKLFKLAQLTIEYLLHSQEYLTTVVTGMEEKIKKEEQIHNVEAKMSEKMTKQERMWQKKMARLKQKEEEGKVVR DRKQEMTEMEEVEEMLRQESDDLVLLYKYLFGLWTSFRSGELTLRTTQFLEELRKNPTLKLMRDELISLLQDSLDKIGIP PETRGIPDNILHSKLAVLKQRRQTTIQGRKDDKKPTGAIDVMGSSPPKKKIEVLDDFNSDSEWDVSPFEEDQPAKTAPK |
|