Gene
| Gene Model ID | pfu_aug1.0_353.1_65365 |
|---|---|
| Locus | scaffold353.1 : 6200 ... 15785 : - |
| To GenomeBrowser | scaffold353.1:6200..15785 |
| Genes list of scaffold | scaffold353.1 |
| Synonym | pfu_aug2.0_648.1_27626 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_353.1_65365.t1 | 2 | 1 | CBFB_NFYA | 384 | 398 | 1.1e-27 | 96.2 | 0.46 | 6900.0 | -2.4 |
| pfu_aug1.0_353.1_65365.t1 | 2 | 2 | CBFB_NFYA | 488 | 544 | 1.1e-27 | 96.2 | 7.7e-32 | 1.1e-27 | 96.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_353.1_65365.t1 | gi|327271341|ref|XP_003220446.1| | 1.0e-30 |
Transcript
| Transcript ID | pfu_aug1.0_353.1_65365.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_353.1_65365.t1 atgaagaaatatcagatttcccgttggaattcctcaaaagagagtctatccagggactttggtacagatggggatattgg tctgcgagaggacattcataattttggagatttcgctcaaagtggggatgctgaaaagggcaataactctgctaatgata tatttaattacattgttcgtgtcaaatccccaacaaacgaacggatgggtaaaattaagagccgttcagaatactttggt gacagcatgctcagtgcacaaacaatgaataaaaatagttcgaatcaaagtaatgaagagaaaggtgtcttagaacgacc gtttctcgataccgtgggtcattctcatgaaaaggatcggtatgtgccgatggccgacaactgtccggacgattctcaag ttctcctaaatcgttgctcaaaccaatttcataaagatggtaaaaaaattcagtcgatcgtagctgttgatgatattggg agaaaagatacaattcctaatgttaaagcgtctccttccgatttgcttcttcattatagggaaggatatgacagcgccat gagggaccacagaaacactacgtcgacatccaggagtttcctgacgggacccctgcaggacgtcacttataactgctaca tgaacgacaaaaaggaaaattccgcagatacacctcagtttcctgcacgaacaccgacgacacagctcaaggacttcaac accaatcagcacgacagacatctggcctttgacacaaagttcacacgatcaaactccgaatttcctcaaaaagatctctc tcgcgatgaatccttgagggaatatgacagtcttcctgggcaaagatgctttgttccgacatcatttcacagcgaactac ttatcaacaacagtaaggttttgtcttcatatatagagaacgcagactacagtgagcaaattcagatggaagccttgcat cattactctaaaagtctggcgcctaaaacaaatctttgccaaaagcagacgactgtaacatttcccatgaacaaaatatg caatgcatacgatcattttgatttcaaaactctcgagccaaaaaatggcaaaatatcatcaaaatggaatatggaagatt taaaatggacaacgtcgtcgtctttggatatgattcagaaaaatcgaatttacagggagcgaatccatgaaaaattggat agatatatacaaacaaaggtggccagttctttacagacgccttccaagagtggtgacgatagcaaaaatattggatgccc tttgacctcagagccagttggcgagatgcataatccatactgggatcaacggaaacttcataatcctcatccatgtcatt ccatccctcaacgaatcagaaatcagagcgaatctgtgtcaaaggttgttaacggcagtagtttacaagcgctaccacta ccgtcatctgaatctccggaagaggaaccactttatgtaaatgctaaacaatataaccgtatcctgaaaagacggatagc gcgagccaagcttgaagccaaagggaaaataccgaaggaaagaaagaaatacctacacgagtctcgacatcgacatgcaa tgagtcgtaacagaggggaaggggggaggttttactccacaaaggaagtgaagatagaaccttatgacgagttggtgctg aaggacgaacctctggatatcattgattcactgactgaaaatggagtaagagctgttccacaattgacaagaatgaatca aacacatgcgcaaacagtttag |
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Protein
| Protein ID | pfu_aug1.0_353.1_65365.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_353.1_65365.t1 MKKYQISRWNSSKESLSRDFGTDGDIGLREDIHNFGDFAQSGDAEKGNNSANDIFNYIVRVKSPTNERMGKIKSRSEYFG DSMLSAQTMNKNSSNQSNEEKGVLERPFLDTVGHSHEKDRYVPMADNCPDDSQVLLNRCSNQFHKDGKKIQSIVAVDDIG RKDTIPNVKASPSDLLLHYREGYDSAMRDHRNTTSTSRSFLTGPLQDVTYNCYMNDKKENSADTPQFPARTPTTQLKDFN TNQHDRHLAFDTKFTRSNSEFPQKDLSRDESLREYDSLPGQRCFVPTSFHSELLINNSKVLSSYIENADYSEQIQMEALH HYSKSLAPKTNLCQKQTTVTFPMNKICNAYDHFDFKTLEPKNGKISSKWNMEDLKWTTSSSLDMIQKNRIYRERIHEKLD RYIQTKVASSLQTPSKSGDDSKNIGCPLTSEPVGEMHNPYWDQRKLHNPHPCHSIPQRIRNQSESVSKVVNGSSLQALPL PSSESPEEEPLYVNAKQYNRILKRRIARAKLEAKGKIPKERKKYLHESRHRHAMSRNRGEGGRFYSTKEVKIEPYDELVL KDEPLDIIDSLTENGVRAVPQLTRMNQTHAQTV |
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