Gene
| Gene Model ID | pfu_aug1.0_353.1_65366 |
|---|---|
| Locus | scaffold353.1 : 26736 ... 41536 : + |
| To GenomeBrowser | scaffold353.1:26736..41536 |
| Genes list of scaffold | scaffold353.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_353.1_65366.t1 | 3 | 1 | RCC1 | 53 | 72 | 1.0e-32 | 112.0 | 0.0024 | 12.0 | 6.2 |
| pfu_aug1.0_353.1_65366.t1 | 3 | 1 | RCC1_2 | 59 | 88 | 1.4e-15 | 56.3 | 3.6e-11 | 1.8e-07 | 30.5 |
| pfu_aug1.0_353.1_65366.t1 | 3 | 2 | RCC1 | 75 | 122 | 1.0e-32 | 112.0 | 8.2e-16 | 4.1e-12 | 46.1 |
| pfu_aug1.0_353.1_65366.t1 | 3 | 2 | RCC1_2 | 110 | 145 | 1.4e-15 | 56.3 | 1.2e-09 | 5.8e-06 | 25.7 |
| pfu_aug1.0_353.1_65366.t1 | 3 | 3 | RCC1 | 134 | 182 | 1.0e-32 | 112.0 | 8.0e-20 | 3.9e-16 | 58.9 |
| pfu_aug1.0_353.1_65366.t1 | 3 | 3 | RCC1_2 | 169 | 185 | 1.4e-15 | 56.3 | 0.00042 | 2.1 | 8.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_353.1_65366.t1 | gi|345788246|ref|XP_003433049.1| | 1.0e-29 |
Transcript
| Transcript ID | pfu_aug1.0_353.1_65366.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_353.1_65366.t1 atgagctcggacggacggacggacagacggacacgacagcgactatatgctcccccaaaaatatttttttcggggagcat gaaaatatttttcgaggagcataaaaatatttttcgggaagacaaggatattatattggactttcagataccggcttcac ttatgaatgagacagtagaacaagttcattctggatggacacataatgtggtcttaacaaagtcaggaaagctattcaca tggggtcgggctgattatgggcagctaggtcggccatatgagcagtcacccgacttcatgcctcggccaataacaggatt ggatgtcatcaaatcggtatcatgtggctccgagcataacctagcatgctctgctaaaaattctttcctttcagttactg gcaaggtgtattcctgggggtggaatgagcatggtatatgtgggactggggatgaagtgaacgtgccatatcccaagcag gtggcagcacttgctaatcggcacgtgaccagtgtgggatgcggagcaggacattcttttgctgtttgtcaaagtgatcc atag |
|
Protein
| Protein ID | pfu_aug1.0_353.1_65366.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_353.1_65366.t1 MSSDGRTDRRTRQRLYAPPKIFFSGSMKIFFEEHKNIFREDKDIILDFQIPASLMNETVEQVHSGWTHNVVLTKSGKLFT WGRADYGQLGRPYEQSPDFMPRPITGLDVIKSVSCGSEHNLACSAKNSFLSVTGKVYSWGWNEHGICGTGDEVNVPYPKQ VAALANRHVTSVGCGAGHSFAVCQSDP |
|