Gene
| Gene Model ID | pfu_aug1.0_35374.1_26712 |
|---|---|
| Locus | scaffold35374.1 : 30 ... 6603 : - |
| To GenomeBrowser | scaffold35374.1:30..6603 |
| Genes list of scaffold | scaffold35374.1 |
| Synonym | pfu_aug2.0_1051.1_04790 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_35374.1_26712.t1 | 1 | 1 | Reprolysin | 2 | 140 | 6.9e-20 | 71.4 | 5.8e-23 | 9.6e-20 | 71.0 |
| pfu_aug1.0_35374.1_26712.t1 | 2 | 1 | Reprolysin_5 | 5 | 109 | 6.4e-07 | 29.4 | 3.9e-10 | 6.4e-07 | 29.4 |
| pfu_aug1.0_35374.1_26712.t1 | 1 | 1 | Reprolysin_3 | 7 | 90 | 7.5e-08 | 32.9 | 8.0e-11 | 1.3e-07 | 32.1 |
| pfu_aug1.0_35374.1_26712.t1 | 1 | 1 | Reprolysin_2 | 15 | 122 | 1.4e-07 | 31.7 | 1.3e-10 | 2.2e-07 | 31.1 |
| pfu_aug1.0_35374.1_26712.t1 | 1 | 1 | Reprolysin_4 | 44 | 135 | 6.0e-08 | 32.4 | 5.9e-11 | 9.7e-08 | 31.7 |
| pfu_aug1.0_35374.1_26712.t1 | 2 | 2 | Reprolysin_5 | 114 | 159 | 6.4e-07 | 29.4 | 0.18 | 300.0 | 1.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_35374.1_26712.t1 | gi|260802889|ref|XP_002596324.1| | hypothetical protein BRAFLDRAFT_145446 [Branchiostoma floridae] | 3.0e-32 |
Transcript
| Transcript ID | pfu_aug1.0_35374.1_26712.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_35374.1_26712.t1 gtctgcagattgtctcggactctggtcaactgcttcataacttctgtcaatggcaaaaacaacaggagtccaacaatgga aaagtctcagatggaactctgcttataacaaagacagatttggtccataatggtgacaagacaaacgtcggtttggcaaa catggcgtccgtctgtaccgtcaataagtgttctgttaacgaggacacaggcctggatactgcactgaccattgctcatg agactggacacacgttgggtatgcagcatgacggcacggggaatggttgtaaggacggagttaacatcatggcggctgga ggctcgtatggaccgacagctgctaaatggtccagctgtagtgctaactatctcagtcagttcctaagttcatcccagtc cagttgtatgggcactgcacccagtgggagtgccgtacatttatacagcatgcagcagcacccgggtgttctgtactcgg ctgaccaacaatgttctatgctgtatggcaaggagacacaggcctgtcattccactacggtattttcactttaccactat ttcatgtcagcaaacattccttccactggagactctgaagttaatattaatatttag |
|
Protein
| Protein ID | pfu_aug1.0_35374.1_26712.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_35374.1_26712.t1 LQIVSDSGQLLHNFCQWQKQQESNNGKVSDGTLLITKTDLVHNGDKTNVGLANMASVCTVNKCSVNEDTGLDTALTIAHE TGHTLGMQHDGTGNGCKDGVNIMAAGGSYGPTAAKWSSCSANYLSQFLSSSQSSCMGTAPSGSAVHLYSMQQHPGVLYSA DQQCSMLYGKETQACHSTTVFSLYHYFMSANIPSTGDSEVNINI |
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