Gene
| Gene Model ID | pfu_aug1.0_3550.1_16131 |
|---|---|
| Locus | scaffold3550.1 : 7 ... 34371 : + |
| To GenomeBrowser | scaffold3550.1:7..34371 |
| Genes list of scaffold | scaffold3550.1 |
| Synonym | pfu_aug2.0_988.1_27962 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3550.1_16131.t1 | 1 | 1 | F-box | 265 | 303 | 1.9e-06 | 27.3 | 1.1e-09 | 4.2e-06 | 26.2 |
| pfu_aug1.0_3550.1_16131.t1 | 1 | 1 | F-box-like | 266 | 303 | 8.6e-11 | 41.3 | 6.3e-14 | 2.3e-10 | 40.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3550.1_16131.t1 | gi|224049628|ref|XP_002198375.1| | PREDICTED: F-box/WD repeat-containing protein 7 [Taeniopygia guttata] | 2.0e-29 |
Transcript
| Transcript ID | pfu_aug1.0_3550.1_16131.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3550.1_16131.t1 atgatatgtgctatagaagaaaacttggaaaaatgcattcaggatttggaagcccgcggatataacagtggaccaaatga ctccatcgctattggaatcggcgatggagacaaagtcagagtttcaacggtcgggaatattgaggtggtgtccaagagtc aaactgatctcttacttcaattcttctccatcaaaggaatgctttcgacaaaaagccttgagaaaattgcggaaggtatt gaaagtaaatgggtggatgtcgctaatgcattgaaagtcgacaaggaccaaatactagagatacaggatcgttttgaaaa caaacgccactgcgccatgcgcatgctggacgaatggagattttctagcaaggcagttgaaagaggaatgagtattactg aggacttaatgtcagcactccgtacagctggatgcgacccttctaccattaaacgggagctgtcggaggatacagatgac agccctatagattctgccccgccctctcctgctaccccaggactgaggagtcagtcagggcttcatagtcatacatatag atcaaggatccctgtacctgtatctggtaaacaatggatgaaaagaaagagcagttgtgacttaggattaatgccatgga aacgtccttgtagaatcaatttttgtgatagtacttttgggaatctgaagaatacaaataggattcacaatctgactgta ggacccagacagaggatcccgtccaaagaaaacccccctcctaaactctcagatttcctagaaatttttcagcttgcctt gtatgtcttatctttcttggagcctcgttcgttacttcgagcggcccagacgtgtcgttactggcgtgtcttggcggagg acaacttactgtggagagagaagtgtcgcgaggaagctattgacgagaacctggtttacggctcaaatcgtctcaggagg cggagcacatcacgttgtccgtggaaatcgctctacatgaggcagcatcaaatcgaacaaaactggaggtccaatgaact cagacctcctaaggttgggaaaaaaagtagaaatgggacggaagaaactaaattgctagtgctggattttgatgtagatg aaaagaaagtgtgtatttga |
|
Protein
| Protein ID | pfu_aug1.0_3550.1_16131.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3550.1_16131.t1 MICAIEENLEKCIQDLEARGYNSGPNDSIAIGIGDGDKVRVSTVGNIEVVSKSQTDLLLQFFSIKGMLSTKSLEKIAEGI ESKWVDVANALKVDKDQILEIQDRFENKRHCAMRMLDEWRFSSKAVERGMSITEDLMSALRTAGCDPSTIKRELSEDTDD SPIDSAPPSPATPGLRSQSGLHSHTYRSRIPVPVSGKQWMKRKSSCDLGLMPWKRPCRINFCDSTFGNLKNTNRIHNLTV GPRQRIPSKENPPPKLSDFLEIFQLALYVLSFLEPRSLLRAAQTCRYWRVLAEDNLLWREKCREEAIDENLVYGSNRLRR RSTSRCPWKSLYMRQHQIEQNWRSNELRPPKVGKKSRNGTEETKLLVLDFDVDEKKVCI |
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