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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_3551.1_23358
Locus scaffold3551.1 : 29555 ... 40085 : -
To GenomeBrowser scaffold3551.1:29555..40085
Genes list of scaffold scaffold3551.1
Synonym pfu_aug2.0_199.1_30405

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_3551.1_23358.t1 1 1 Zip 32 319 0.0 197.7 0.0 0.0 197.4

Transcript
Transcript IDpfu_aug1.0_3551.1_23358.t1
Definition-
>pfu_aug1.0_3551.1_23358.t1
atgcagacaataaggttgaccaatacacggatagtaaatgcaaacattgttcgttatctttcgtccatgagtgtatcagt
gtcgtgtcaggatgttatcattacaggtacgttaggattcggactactaccttttcttttatccaaatgcttgaagaaaa
agaaaatttcatctgaaaagtacgaaaaaatcatcggctatctgaattcttttgccggaggtgtttttctagggacatca
gtgcttcatctgttaccggaagcagtagaagaattcgaacacgacgttagctatgagtacccaatcgcggaagcaatcac
gtgtgctggttttttgttggttatgttcttggagcaagccatgatatattgctctagtgcggattcaagtctccatcgtt
ctcatggacatgataacaagagtatgcaaaatgatgaaagtccaaacgaagtgaagaaccaaaacgtttttagcattgaa
tcatcacaaaatccggacgcatcagagaaaagaaccgataaaaaatcccgttttcgttctttgattgtaattttggcatt
gtcattacatgtgatatttgaaggaatcgtagtagggacccagaatagcgaggatgacgtgtggattttacttggtattc
tgtctctccataagtgtatcgtagctttcagcgtgggcatcaatatagaactcaatatatcgtcgtttaagaaagcattt
gcagctttgtttgtattttctatcatagcacccattggcgtcgccatcggaatagttgtcacagagacaggaaccggaaa
ttctcacgggatagcagccggggttttacaaagtctggctaccggaacttttctgtacgttaccttcttcgagatgttac
aaaaagaagttggtcatggaaagtcgattttgaaagtaatatgtgtaacaatcggtttcctcgtcattgtaggaatccag
tttctacctgataaggactga

Protein
Protein IDpfu_aug1.0_3551.1_23358.t1
Definition-
>pfu_aug1.0_3551.1_23358.t1
MQTIRLTNTRIVNANIVRYLSSMSVSVSCQDVIITGTLGFGLLPFLLSKCLKKKKISSEKYEKIIGYLNSFAGGVFLGTS
VLHLLPEAVEEFEHDVSYEYPIAEAITCAGFLLVMFLEQAMIYCSSADSSLHRSHGHDNKSMQNDESPNEVKNQNVFSIE
SSQNPDASEKRTDKKSRFRSLIVILALSLHVIFEGIVVGTQNSEDDVWILLGILSLHKCIVAFSVGINIELNISSFKKAF
AALFVFSIIAPIGVAIGIVVTETGTGNSHGIAAGVLQSLATGTFLYVTFFEMLQKEVGHGKSILKVICVTIGFLVIVGIQ
FLPDKD

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