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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_35565.1_70168
Locus scaffold35565.1 : 1 ... 912 : +
To GenomeBrowser scaffold35565.1:1..912
Genes list of scaffold scaffold35565.1
Synonym pfu_aug2.0_74.1_13536

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_35565.1_70168.t1 1 1 7TM_GPCR_Srw 27 291 6.0e-08 32.1 4.2e-11 1.2e-07 31.1
pfu_aug1.0_35565.1_70168.t1 1 1 7tm_1 38 264 1.0e-12 47.7 4.3e-16 1.3e-12 47.4

Transcript
Transcript IDpfu_aug1.0_35565.1_70168.t1
Definition-
>pfu_aug1.0_35565.1_70168.t1
gatgacacagccattgacgagccgattccatccataattactgctctggaaagattcaactatggatatttgccattcgt
ctttatattgggttgcctcggcgatgccctcatcattttcgtgatgagatccaaaaagttttcctctaacacgtgtagtc
tggctattttggcattggctctatcagatacaaccctccttttctgccatccattcaataaagccttcgtcatcaagctt
gtcggtatggaagtaagaagtctgagctctgtcggctgcaaaatttactacgtcattcgaagaacatcgaaaatgtgttc
ttcctggttcgtcgtgtatctctgctttgagaagtttatgtccatttggtcatcactaaaggtcaaatcattgataacca
agaaatttgtcaatgcttacatcattattgtggtggttgtattgctagctttcactagcgggtggggctatgccagtgac
gtggatccggtcagcggtaaatgccaacctgacctgtacgacaggaaggatccacagagtgtgagtacatggcggagaat
gttgggatctggtgtcaccttgtacgccattgtacctatgataatattgttgatccttacgcccatgattctcttcaaac
tcgccggacaagcgcaaaaatttgagtcgtctgcctattcgaaaacatcctcacgtataacagcgatgctacttttaatt
gtaatctcctacataattctgattttacccatatcaatggtccatattctggcgacatacctcggcataaaatctttcgg
cgacagcaaacttgacttcacaatttttaaagagattgtgcaaattctaaataattttctagtcgcaacgaagtgcatat
ga

Protein
Protein IDpfu_aug1.0_35565.1_70168.t1
Definition-
>pfu_aug1.0_35565.1_70168.t1
DDTAIDEPIPSIITALERFNYGYLPFVFILGCLGDALIIFVMRSKKFSSNTCSLAILALALSDTTLLFCHPFNKAFVIKL
VGMEVRSLSSVGCKIYYVIRRTSKMCSSWFVVYLCFEKFMSIWSSLKVKSLITKKFVNAYIIIVVVVLLAFTSGWGYASD
VDPVSGKCQPDLYDRKDPQSVSTWRRMLGSGVTLYAIVPMIILLILTPMILFKLAGQAQKFESSAYSKTSSRITAMLLLI
VISYIILILPISMVHILATYLGIKSFGDSKLDFTIFKEIVQILNNFLVATKCI

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