Gene
| Gene Model ID | pfu_aug1.0_3573.1_52029 |
|---|---|
| Locus | scaffold3573.1 : 19335 ... 45235 : - |
| To GenomeBrowser | scaffold3573.1:19335..45235 |
| Genes list of scaffold | scaffold3573.1 |
| Synonym | pfu_aug2.0_374.1_14067 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3573.1_52029.t1 | 1 | 1 | 7tm_2 | 48 | 130 | 1.7e-19 | 69.8 | 1.9e-23 | 2.9e-19 | 69.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3573.1_52029.t1 | gi|260788881|ref|XP_002589477.1| | hypothetical protein BRAFLDRAFT_88336 [Branchiostoma floridae] | 2.0e-25 |
Transcript
| Transcript ID | pfu_aug1.0_3573.1_52029.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3573.1_52029.t1 atggatattgcgcagattttgcttcgagaaaatgtatggcagacggccaatggcagctaccagcaagataaggctgatgt acaacattgggtatggtatctccctcgtgtcgttgtcagtggccgtctttatcatgatttacttcaagttaatttctttt tcttcatcaacatcttaagagctcttatgactaagatcaagattaacagatcacgggcatcatcaagtaataagtacaaa cgatttgccaaagccacccttgttttgatacccctttttggggttcagtatgttgtttttattggtttccctgacaacct cgaaccggaagtggaagtagtaaagctgtactttgagatgttcttcaattcttttcagggattattagttgcagtactat tctgttttcttaatggagaggtacaaacagaaattatgaaagtagtatgtaaacgtggaccatactacagatatagacgc tactatcgcgcatcatttttgggcaactcccagtgcgcatgtcaaaggacaaaatcatctccaaatatgtcggacaacaa aagcagacgagcttcagctgatattagttcctgtttattagcagattcaaaatcaaaatttgtgaaatcatgttactgtc attggcacgtagattccaagggacacctttgcagacattttatcaagaggagtaccaataaaacctgcgcccatgaaaat aatttacgaagagcggaaagctgtttatga |
|
Protein
| Protein ID | pfu_aug1.0_3573.1_52029.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3573.1_52029.t1 MDIAQILLRENVWQTANGSYQQDKADVQHWVWYLPRVVVSGRLYHDLLQVNFFFFINILRALMTKIKINRSRASSSNKYK RFAKATLVLIPLFGVQYVVFIGFPDNLEPEVEVVKLYFEMFFNSFQGLLVAVLFCFLNGEVQTEIMKVVCKRGPYYRYRR YYRASFLGNSQCACQRTKSSPNMSDNKSRRASADISSCLLADSKSKFVKSCYCHWHVDSKGHLCRHFIKRSTNKTCAHEN NLRRAESCL |
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