Gene
| Gene Model ID | pfu_aug1.0_3575.1_66734 |
|---|---|
| Locus | scaffold3575.1 : 76 ... 24620 : + |
| To GenomeBrowser | scaffold3575.1:76..24620 |
| Genes list of scaffold | scaffold3575.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3575.1_66734.t1 | 3 | 1 | Bactofilin | 20 | 70 | 1.9e-08 | 34.2 | 1.8e-05 | 0.015 | 15.2 |
| pfu_aug1.0_3575.1_66734.t1 | 3 | 2 | Bactofilin | 64 | 130 | 1.9e-08 | 34.2 | 1.4e-07 | 0.00012 | 22.0 |
| pfu_aug1.0_3575.1_66734.t1 | 3 | 3 | Bactofilin | 111 | 137 | 1.9e-08 | 34.2 | 0.0028 | 2.5 | 8.1 |
| pfu_aug1.0_3575.1_66734.t1 | 1 | 1 | Ank_2 | 186 | 260 | 2.3e-17 | 63.1 | 3.5e-19 | 3.1e-16 | 59.4 |
| pfu_aug1.0_3575.1_66734.t1 | 2 | 1 | Ank_5 | 186 | 237 | 3.5e-13 | 49.3 | 3.1e-11 | 2.7e-08 | 33.7 |
| pfu_aug1.0_3575.1_66734.t1 | 4 | 1 | Ank_4 | 189 | 217 | 6.6e-18 | 64.7 | 9.6e-06 | 0.0084 | 16.6 |
| pfu_aug1.0_3575.1_66734.t1 | 2 | 1 | Ank | 197 | 228 | 1.1e-15 | 56.4 | 2.4e-09 | 2.1e-06 | 27.2 |
| pfu_aug1.0_3575.1_66734.t1 | 2 | 1 | Ank_3 | 197 | 225 | 1.9e-12 | 46.1 | 4.1e-07 | 0.00036 | 20.5 |
| pfu_aug1.0_3575.1_66734.t1 | 4 | 2 | Ank_4 | 199 | 242 | 6.6e-18 | 64.7 | 6.5e-13 | 5.6e-10 | 39.4 |
| pfu_aug1.0_3575.1_66734.t1 | 2 | 2 | Ank_5 | 229 | 270 | 3.5e-13 | 49.3 | 1.1e-07 | 9.9e-05 | 22.4 |
| pfu_aug1.0_3575.1_66734.t1 | 2 | 2 | Ank | 230 | 260 | 1.1e-15 | 56.4 | 4.6e-09 | 4.0e-06 | 26.3 |
| pfu_aug1.0_3575.1_66734.t1 | 2 | 2 | Ank_3 | 230 | 256 | 1.9e-12 | 46.1 | 1.1e-07 | 9.4e-05 | 22.3 |
| pfu_aug1.0_3575.1_66734.t1 | 4 | 3 | Ank_4 | 233 | 270 | 6.6e-18 | 64.7 | 4.1e-08 | 3.6e-05 | 24.1 |
| pfu_aug1.0_3575.1_66734.t1 | 3 | 1 | Myosin_head | 385 | 523 | 0.0 | 210.8 | 0.0 | 0.0 | 161.0 |
| pfu_aug1.0_3575.1_66734.t1 | 4 | 4 | Ank_4 | 453 | 469 | 6.6e-18 | 64.7 | 0.78 | 680.0 | 0.9 |
| pfu_aug1.0_3575.1_66734.t1 | 3 | 2 | Myosin_head | 534 | 588 | 0.0 | 210.8 | 1.1e-12 | 9.5e-10 | 37.1 |
| pfu_aug1.0_3575.1_66734.t1 | 3 | 3 | Myosin_head | 599 | 648 | 0.0 | 210.8 | 0.00025 | 0.22 | 9.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3575.1_66734.t1 | gi|115939944|ref|XP_001183332.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_3575.1_66734.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3575.1_66734.t1 atgttaccttcggctactcttgaccttgacattgaaggtaaccgtgacattgaccttgacattgaaggtaacattgacat tgaaggtaaccttgacattgaaggtaacattgtcattgaaggtaacattgacattgacggtaacattgacagtgaaggta acattgaccttgacattgaaggtaaccttgacattgacattgaaggtaacattgacactgaaggtaacattgacattgac ggtaacattaacattgaagggaaccttgacattgaagggaaccttgagattgaaggtaacattgacattgaaggtaacct tgaccttgacattgaaggtaaccttgacattgaaggtaacattgacattgaagggaaccttgacattgaagggaaccttg accttgacattgaagatcattgttcagaggggtcggagtcccatcaaatcgtgctacaacaaatggaagccatgggcatt gaccaaaagaagcacaaggagctacagttatctataccgagacagatgtaccgagacgtccagaaccacgttagtaccgg gggtaacgtcaacaagacgtcagagtctgggatatccctgatacacatagcctgtgctaatggatatcgtaaagttttac gattactgataaagaacggagcagacgtcaataccacagatgacttagggtggactcctctacatgtggcagctagattc agtcagatgaagacggttcagtccttactgaagagtggtgccgaccctcttctgaagaatgtaaataacgacactccgtt gtccgtagctacggctgacgatgttaagactctgttactgaaggccgagagaaagaaacagaaacaggtggcatggaggg catcggaactggtagtagatgacgaggaagacgatgaggaagatgatggattgaccgccggtaacttagtcaggatcaac agcaaaactgtgcgtaacagacactcttcattagccaaagaggatgagatcctagaagctaagaagaggttgatttatga cacgcctgacttgtccaaagagaggagcacatcagaggaggattatgaagtaccagaggagcaggaggaggaggatgtct atgtcagtaaaatatggagaaatgttgatatagcctcgacaatgattggaaatattctaatggctgtcaacccattcaaa gacctgcccctctactctaaggctatctcagctcgttatcatgctaaaggaaacacaaacctgcctccccacatatatag tacggcagactgggcacaccgctgtctgatacgggaacaggcctctcagtgctgcgttatatcgggagaaagtgggtcgg gaaaaacagagtcctgtaaactcctggtgcagcatctggtttcagtagctggaagtgaggagagcaacctcaaccaaaaa atttcacaggcgaatccagtgttagaggctttcggcaatgccaggactgtgatgaacattaattctagtagatttgctaa gtacatggagctcaactttaatactcatgggaaaataacaggaggtcaaaagtatccaggagtttacaaggccccaaagg atggagggaagaccttcacaatcttacactatgctggtgctgtgaaatactatctggatggagtgttggagaagaacaaa gatactttacctaatgcagtcatgtataccatgaaaaccagtaacagtctattgatcaaggagatgttccagtcccgtgt cacacgtacagggtccatagctccgagctatcggcaacagaggtacaattcactgtatatgtgtgtaataccctctcaca gtatgatcccagagtctgagaaatgtaaacgaatgttacagtattgtaaagtgaaaccagacagtgaaggatttaagatg gggaaaacaaaggtgtttctaagagaccaggaactggaaactttgagtgatgcatctaaaaaggtcagagaaagagtcat caaggcccaagcagttgcaagaggttatcttgcaagaagacgcgtacagaaactccgccaagagcgacgcaatcggcaag aaaagcaagtatcccatacgttccaacaattacaattcaagcaggagcaaatctgggggatcttaaatgaccagcggatc catgataaagacagatacgaaactgagacgaaagccgaagtagttggagaaatctgtaaatctttagacgatttggaaac catgcttaacgagtacgtgaatgtttcggagttgggaaagtccggaaaaactaacgttttcaaggtcattcttgagtgca atatctttgtagatcttcatcattttctgttgaaactctactatgtccttcttgacatcttgacgtggattgtcgaagtc tcatag |
|
Protein
| Protein ID | pfu_aug1.0_3575.1_66734.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3575.1_66734.t1 MLPSATLDLDIEGNRDIDLDIEGNIDIEGNLDIEGNIVIEGNIDIDGNIDSEGNIDLDIEGNLDIDIEGNIDTEGNIDID GNINIEGNLDIEGNLEIEGNIDIEGNLDLDIEGNLDIEGNIDIEGNLDIEGNLDLDIEDHCSEGSESHQIVLQQMEAMGI DQKKHKELQLSIPRQMYRDVQNHVSTGGNVNKTSESGISLIHIACANGYRKVLRLLIKNGADVNTTDDLGWTPLHVAARF SQMKTVQSLLKSGADPLLKNVNNDTPLSVATADDVKTLLLKAERKKQKQVAWRASELVVDDEEDDEEDDGLTAGNLVRIN SKTVRNRHSSLAKEDEILEAKKRLIYDTPDLSKERSTSEEDYEVPEEQEEEDVYVSKIWRNVDIASTMIGNILMAVNPFK DLPLYSKAISARYHAKGNTNLPPHIYSTADWAHRCLIREQASQCCVISGESGSGKTESCKLLVQHLVSVAGSEESNLNQK ISQANPVLEAFGNARTVMNINSSRFAKYMELNFNTHGKITGGQKYPGVYKAPKDGGKTFTILHYAGAVKYYLDGVLEKNK DTLPNAVMYTMKTSNSLLIKEMFQSRVTRTGSIAPSYRQQRYNSLYMCVIPSHSMIPESEKCKRMLQYCKVKPDSEGFKM GKTKVFLRDQELETLSDASKKVRERVIKAQAVARGYLARRRVQKLRQERRNRQEKQVSHTFQQLQFKQEQIWGILNDQRI HDKDRYETETKAEVVGEICKSLDDLETMLNEYVNVSELGKSGKTNVFKVILECNIFVDLHHFLLKLYYVLLDILTWIVEV S |
|