Gene
| Gene Model ID | pfu_aug1.0_3577.1_30452 |
|---|---|
| Locus | scaffold3577.1 : 5673 ... 17945 : - |
| To GenomeBrowser | scaffold3577.1:5673..17945 |
| Genes list of scaffold | scaffold3577.1 |
| Synonym | pfu_aug2.0_352.1_07398 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3577.1_30452.t1 | 1 | 1 | GMC_oxred_N | 11 | 159 | 6.3e-34 | 117.4 | 1.3e-37 | 9.5e-34 | 116.8 |
| pfu_aug1.0_3577.1_30452.t1 | 1 | 1 | GMC_oxred_C | 186 | 330 | 1.3e-35 | 122.8 | 3.5e-39 | 2.6e-35 | 121.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3577.1_30452.t1 | gi|193664529|ref|XP_001945226.1| | PREDICTED: glucose dehydrogenase [FAD, quinone] [Acyrthosiphon pisum] | 1.00053e-42 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3577.1_30452.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3577.1_30452.t1 atgatatcattgatgacgctagcgagaggtcgctttattcgaggtcgtatcctcggtggtaccagtatggtgaataacat ggtgtatatgagaggtagcagtaagaagtatgatgactgggagaagataggaggctgtaaaggatgggggtacaaagata tcattccatatttcctcaaatctgaacatatcgatattcaacatcttacaacttctgcatatcattccaagaaaggatca ctcacaatatctgacggctcttctgctgtcaaaccattggccgatgtatttcgtagagctacaaagcagattggcgttaa gagtaacgactgtaacgggaaagacttcacaggtcattgtgaccaccaaacaacaaccagagatggagagcgtgttagcg tgactggtaccttcttacgaccagcaatggaaaggaaaaatttacacatcggacttcaaagccatgtaacaaaggtccag aaggaacttctcccggaacgtaacggaaataggaataacacagaagggtttacgatgatgatacaattactttatccaaa gagctcgggcacactgcgcctgaagagttcgaatccctttgaccaccctgaggtggatccgaattatttagcccaagaag atgatactcaagccttgataagaggattaaaactattttacaagatgatgaaaacacagtcctttcgagatgtacaggct agaccgccgtatactccattttcacagtgttcaaaattcaaaatgaactcggaccggtatttcgagtgtttgatacgcca tctgtcagtgtcaggaaataatccaatcggtgcttgcagaatgggcgaaggcagtgacgttatgagtgtagtcgattcca aattgagggtcaaaggaatagaccgtctgcgggtggctgatgcttctgtaatgccgtctttagtgtcgtctgataacaac gccccggttgtcatggtagcagagaaagcagccgacattatcaaaatcgctcataaaattcaacgtaacaattacaaaca aaagaaaaatggtgttaagagaaaatctaggtag |
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Protein
| Protein ID | pfu_aug1.0_3577.1_30452.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3577.1_30452.t1 MISLMTLARGRFIRGRILGGTSMVNNMVYMRGSSKKYDDWEKIGGCKGWGYKDIIPYFLKSEHIDIQHLTTSAYHSKKGS LTISDGSSAVKPLADVFRRATKQIGVKSNDCNGKDFTGHCDHQTTTRDGERVSVTGTFLRPAMERKNLHIGLQSHVTKVQ KELLPERNGNRNNTEGFTMMIQLLYPKSSGTLRLKSSNPFDHPEVDPNYLAQEDDTQALIRGLKLFYKMMKTQSFRDVQA RPPYTPFSQCSKFKMNSDRYFECLIRHLSVSGNNPIGACRMGEGSDVMSVVDSKLRVKGIDRLRVADASVMPSLVSSDNN APVVMVAEKAADIIKIAHKIQRNNYKQKKNGVKRKSR |
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