Gene
Gene Model ID | pfu_aug1.0_35838.1_62836 |
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Locus | scaffold35838.1 : 3186 ... 6548 : + |
To GenomeBrowser | scaffold35838.1:3186..6548 |
Genes list of scaffold | scaffold35838.1 |
Synonym | pfu_aug2.0_841.1_04620 |
Manual annotation
Study field | Transcription Factors |
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Gene name | Pfu-orphan-HLH-h-b |
Description | Best hit to BAB83913 putative bHLH transcription factor [Homo sapiens] with 2e-13 by a BLASTP search against NCBI Homo sapiens nr database. Almost identical to Pfu-orphan-HLH-h |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_35838.1_62836.t1 | 1 | 1 | HLH | 11 | 58 | 2.2e-12 | 46.4 | 1.3e-15 | 3.2e-12 | 45.9 |
Transcript
Transcript ID | pfu_aug1.0_35838.1_62836.t1 |
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Definition | - |
>pfu_aug1.0_35838.1_62836.t1 atgaaaaatgcagtaaaaggaacagacaaaagaaacgcaagggagaggaagagagtaaaagggatcaatgagatgttgac tattctcaagcaaaaacttccagaagaatggaccagtagaaaaatgagcaagctggaaattctgaggaagtcggcgctgt atattcggcgactaagtcagatgacgcagacggaaacacaaaacgaagatttggcgtcaagcacatgtgcggcaacaaca acatcatcatcgacaccaatagcagcagacacagcctcaggaaaccagacgatccagtcagtgcagacgacatctttgaa agatgcaatggaattaacatttgac |
Protein
Protein ID | pfu_aug1.0_35838.1_62836.t1 |
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Definition | - |
>pfu_aug1.0_35838.1_62836.t1 MKNAVKGTDKRNARERKRVKGINEMLTILKQKLPEEWTSRKMSKLEILRKSALYIRRLSQMTQTETQNEDLASSTCAATT TSSSTPIAADTASGNQTIQSVQTTSLKDAMELTFD |