Gene
| Gene Model ID | pfu_aug1.0_3588.1_01485 |
|---|---|
| Locus | scaffold3588.1 : 5829 ... 21165 : - |
| To GenomeBrowser | scaffold3588.1:5829..21165 |
| Genes list of scaffold | scaffold3588.1 |
| Synonym | pfu_aug2.0_265.1_17207 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3588.1_01485.t1 | 2 | 1 | GNT-I | 22 | 106 | 4.7e-33 | 114.3 | 2.1e-30 | 3.1e-26 | 91.9 |
| pfu_aug1.0_3588.1_01485.t1 | 2 | 2 | GNT-I | 107 | 148 | 4.7e-33 | 114.3 | 1.1e-09 | 1.6e-05 | 23.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3588.1_01485.t1 | gi|121582342|ref|NP_001073440.1| | mannoside acetylglucosaminyltransferase 1 [Danio rerio] | 6.0e-23 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| egg-4cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_3588.1_01485.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3588.1_01485.t1 atgaaaaatcttggtacgaaacggtatcggtacgaaagatcccggaaccgttcacagggacacagaaaagatgcagagcg ttttccgattatagtcagtcaggactgtgggcatcaaccgactgctgacgttataaacaaatatgtcaaagacaagtcag tggaaagtcatataaagcatccagatcttagtgatataaaattgccatggccacaacgaaaatttaccggatattttaaa atcagccgacattataaatgggcgctgaaccaaatatttaatgtttttaattattcggctgtgataatagtagaagaatt tacaatagctgaggtgacctcagggaataagaagcatcttaaagctgttagagtgacatactccacaaaagaacagttta aatccactgccaagaagctgggaatcatggacgactttaaggacatcaacttctatgatctggaacaggcatctgttcag agtcagaggggctaa |
|
Protein
| Protein ID | pfu_aug1.0_3588.1_01485.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3588.1_01485.t1 MKNLGTKRYRYERSRNRSQGHRKDAERFPIIVSQDCGHQPTADVINKYVKDKSVESHIKHPDLSDIKLPWPQRKFTGYFK ISRHYKWALNQIFNVFNYSAVIIVEEFTIAEVTSGNKKHLKAVRVTYSTKEQFKSTAKKLGIMDDFKDINFYDLEQASVQ SQRG |
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