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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_359.1_43619
Locus scaffold359.1 : 20256 ... 21717 : +
To GenomeBrowser scaffold359.1:20256..21717
Genes list of scaffold scaffold359.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_359.1_43619.t1 1 1 Exo_endo_phos 43 225 3.6e-08 33.6 6.9e-12 5.1e-08 33.1
pfu_aug1.0_359.1_43619.t1 1 1 Exo_endo_phos_2 137 245 3.0e-07 30.0 9.0e-11 6.7e-07 28.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_359.1_43619.t1 gi|156344727|ref|XP_001621289.1| hypothetical protein NEMVEDRAFT_v1g222147 [Nematostella vectensis] 1.0e-15

Transcript
Transcript IDpfu_aug1.0_359.1_43619.t1
Definition-
>pfu_aug1.0_359.1_43619.t1
atgaatcctggacccactaatggtactgacctctcatatccttctcccagcacatctaccacctctactgattcaacttt
tacattagaacatgaactaaaatctaaactatctattatcaaccttaatgtacaaagtctcttaccaaaaatcgacctaa
taaaagccgagttatccgattttgacgttctgagtttcactgagtcttggctcaagccaacatctgaccttgatgacatt
tcaatttcgggtttttcgcctccatataattatattagacaggatagaacaggtgggggtgtttcggtctacgttaagga
aaatatccattctaagcgtcgagatgaccttgaggcagactcttgtgagagtgtttggatagaaatgtttttgcataatc
gaaaagttttacttggtacgttctacaggccccctaactcgacgtccgaaatatgggatggaataaaattttccatcgaa
aaggcgtgtaatacaggtataaataccattttagtcactggtgactttaactgtgaccaaaagatctcgacctcaaacga
tataactgacatttgtgatacaatgaatttcagctcgattattaatgaacctacacattttaccgaaacttcacagtcta
tccttgatcttatattaactaattccccaaactcaatctttctatcgggcgttggtgatccattcttacccaatgagatt
agatatcactgtcctgtttatgcttttcttaatatcaataaacctaaacgtctttctattacccgaaaaatatggcttta
taaagaaggtgattacgatgcttacagaaatgatatttcaaatatagatattgataatataataaataacgaccaaacga
atcagccaatcgaatcacagataaaattcttgaaatcgcttcatgtcgcatcccaaacaaaatag

Protein
Protein IDpfu_aug1.0_359.1_43619.t1
Definition-
>pfu_aug1.0_359.1_43619.t1
MNPGPTNGTDLSYPSPSTSTTSTDSTFTLEHELKSKLSIINLNVQSLLPKIDLIKAELSDFDVLSFTESWLKPTSDLDDI
SISGFSPPYNYIRQDRTGGGVSVYVKENIHSKRRDDLEADSCESVWIEMFLHNRKVLLGTFYRPPNSTSEIWDGIKFSIE
KACNTGINTILVTGDFNCDQKISTSNDITDICDTMNFSSIINEPTHFTETSQSILDLILTNSPNSIFLSGVGDPFLPNEI
RYHCPVYAFLNINKPKRLSITRKIWLYKEGDYDAYRNDISNIDIDNIINNDQTNQPIESQIKFLKSLHVASQTK

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