Gene
| Gene Model ID | pfu_aug1.0_359.1_43620 |
|---|---|
| Locus | scaffold359.1 : 23088 ... 27305 : - |
| To GenomeBrowser | scaffold359.1:23088..27305 |
| Genes list of scaffold | scaffold359.1 |
| Synonym | pfu_aug2.0_37.1_23292 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_359.1_43620.t1 | 1 | 1 | BTB | 23 | 69 | 1.3e-08 | 34.7 | 5.5e-12 | 2.7e-08 | 33.7 |
| pfu_aug1.0_359.1_43620.t1 | 2 | 1 | BACK | 44 | 60 | 1.2e-08 | 34.7 | 0.21 | 1000.0 | -0.5 |
| pfu_aug1.0_359.1_43620.t1 | 2 | 2 | BACK | 81 | 175 | 1.2e-08 | 34.7 | 1.1e-11 | 5.5e-08 | 32.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_359.1_43620.t1 | gi|340377877|ref|XP_003387455.1| | 2.0e-14 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_359.1_43620.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_359.1_43620.t1 atgttcacatgcgaaatgagggagaaagtatcatcagaaatcgatttatcggagtcattgatgctggacgatccagagaa atttggcaccgtacttgactatctgtacactggcaccattaccgtcacagtgtctaatgtggaggatgtactacggatct ccgacttccttcttttagacgaggtcaaggattactgtaaacaattctatttggatttaggaaacttagatctttctaat tgtttacgaattaggttcctggcagagaatcacaaccttccggaagttgccgaaccttgtcaaaatatcatcgaatctcg ttttcacgattacctcatatttcatgacgaaattttggatctgcagccggaatttttcttcctccttttagaatctccgg gaacgctacatagcacggtatataacgatctcaagaaactggtacagagatgggtagagcacgataaaactcacagagaa cggtatctagatgacctgtacatcaacatcaaattgtacttgtacgaaagctgtgaagtaacaagcgctctttctacaca tgaccggaaaccaaaattatctaagagaatgcagtcctcgctctccgagaaacaaagaggagcttgcatgtctcacaatt tttgtcatagatatgaaaacgttctccatcgttctatgactttgaatgatagcatctgtccaatattgtatgcagtcgtt agcaatcaaggaatgaaatttatgaaaatgttagtattcagtgtacttgaccaaaaatggttccactttcctttcaatgg agaaaaactatgtcacatgattccttcccgccaatcaatatctgctctcgttgctcatggaaactgcttatacatgtacc tctgctcgagcttcccgtatcccacggacatgttgaaaatctatattcttgccctggacatgttaaagggacaacctata ttgtactcgttcaaaactggggattactacaatccgtgctacaggaccaccctgaccaatcataggtcagtacctccggc catggtagcctgcggacctcatctctatgtggtcggaaacagagaagggacgggtaacctttttctgtgcaatatgaatn aattctcaatacaaatgcttcccaatacccggtgcacgtttcatttctctcgccagggccgctgtcaagaacgaccgtct gatatttctatggttccgtcacagaacaggtccgtctga |
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Protein
| Protein ID | pfu_aug1.0_359.1_43620.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_359.1_43620.t1 MFTCEMREKVSSEIDLSESLMLDDPEKFGTVLDYLYTGTITVTVSNVEDVLRISDFLLLDEVKDYCKQFYLDLGNLDLSN CLRIRFLAENHNLPEVAEPCQNIIESRFHDYLIFHDEILDLQPEFFFLLLESPGTLHSTVYNDLKKLVQRWVEHDKTHRE RYLDDLYINIKLYLYESCEVTSALSTHDRKPKLSKRMQSSLSEKQRGACMSHNFCHRYENVLHRSMTLNDSICPILYAVV SNQGMKFMKMLVFSVLDQKWFHFPFNGEKLCHMIPSRQSISALVAHGNCLYMYLCSSFPYPTDMLKIYILALDMLKGQPI LYSFKTGDYYNPCYRTTLTNHRSVPPAMVACGPHLYVVGNREGTGNLFLCNMNXFSIQMLPNTRCTFHFSRQGRCQERPS DISMVPSQNRSV |
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