Gene
| Gene Model ID | pfu_aug1.0_35934.1_48213 |
|---|---|
| Locus | scaffold35934.1 : 1 ... 6536 : + |
| To GenomeBrowser | scaffold35934.1:1..6536 |
| Genes list of scaffold | scaffold35934.1 |
| Synonym | pfu_aug2.0_2822.1_08993 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_35934.1_48213.t1 | 1 | 1 | Sec7 | 2 | 56 | 8.0e-06 | 25.6 | 5.8e-10 | 8.6e-06 | 25.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_35934.1_48213.t1 | gi|260833300|ref|XP_002611595.1| | hypothetical protein BRAFLDRAFT_63757 [Branchiostoma floridae] | 3.0e-14 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_35934.1_48213.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_35934.1_48213.t1 acgtgacgtgttagaacatctgctgaaattacagaattttcgtgatcagtttttgccgaatgcactcaggaaactgtttg gcagcatatcagctccggaccaaaggggagactacttatctgatatcatcgacaagtttgccgaaagattctgttcatgt aatcctaaactgggattagacaaag |
|
Protein
| Protein ID | pfu_aug1.0_35934.1_48213.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_35934.1_48213.t1 RDVLEHLLKLQNFRDQFLPNALRKLFGSISAPDQRGDYLSDIIDKFAERFCSCNPKLGLDK |
|