Gene
| Gene Model ID | pfu_aug1.0_3598.1_16135 |
|---|---|
| Locus | scaffold3598.1 : 3476 ... 12503 : + |
| To GenomeBrowser | scaffold3598.1:3476..12503 |
| Genes list of scaffold | scaffold3598.1 |
| Synonym | pfu_aug2.0_83.1_10236 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3598.1_16135.t1 | 1 | 1 | Lipase | 12 | 247 | 0.0 | 246.7 | 0.0 | 0.0 | 246.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3598.1_16135.t1 | gi|168420295|gb|ACA23976.1| | pancreatic lipase-related protein [Mizuhopecten yessoensis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| trochophore | 1 |
| >Adult tissues | |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3598.1_16135.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3598.1_16135.t1 atgaaaatctcggtttacggaattggcgaaaagttccgcaacgaccaggaagctaagaatgtaatagcagtcgattggtc gaatggtgccgattcttctaactacttcatatcagctgcaaatacccgagttgttggtgccttaatagctcgtatgatgt cgcttcttcacgacaaaactcaggctagttatggagatatgcatgtagtgggtcacagtctcggttctcatataggaggg tatgctggtgaagaaacacccggccttggtagaataacaggtttagatcctgcggggccatgctttgaggaacaagatgt tatagtgaggctagatccagatgacgcaaagtatgtcgatgtcatacacacagatggcgacagcctattggcattgggtt ttggctgtgacagaccattgggtgatgccgatttctatcctaatggtggagtagaccaaccaggatgtccgactcacata aaggatcatctcttcagcattataacaggacaaatatcagaattgacggacggagtcggttgcagccatttgagagctct ggacctgttcaccgagtcaattacgtcatcatgtaaattccagtccgtgccatgcagcagcaaatccaagtatgataaca atcaatgtactcaatgtggacatggctgtgccgatatgggatattacagcagcccactaagccgtggatcattctttctc acaacctctgatggatcaaatggatcaccttactgtaaggcataa |
|
Protein
| Protein ID | pfu_aug1.0_3598.1_16135.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3598.1_16135.t1 MKISVYGIGEKFRNDQEAKNVIAVDWSNGADSSNYFISAANTRVVGALIARMMSLLHDKTQASYGDMHVVGHSLGSHIGG YAGEETPGLGRITGLDPAGPCFEEQDVIVRLDPDDAKYVDVIHTDGDSLLALGFGCDRPLGDADFYPNGGVDQPGCPTHI KDHLFSIITGQISELTDGVGCSHLRALDLFTESITSSCKFQSVPCSSKSKYDNNQCTQCGHGCADMGYYSSPLSRGSFFL TTSDGSNGSPYCKA |
|