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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_36000.1_70181
Locus scaffold36000.1 : 276 ... 6463 : +
To GenomeBrowser scaffold36000.1:276..6463
Genes list of scaffold scaffold36000.1
Synonym pfu_aug2.0_388.1_27329

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_36000.1_70181.t1 1 1 Aldo_ket_red 23 96 6.9e-13 48.0 5.4e-17 8.0e-13 47.8

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_36000.1_70181.t1 gi|321474717|gb|EFX85682.1| hypothetical protein DAPPUDRAFT_127566 [Daphnia pulex] 3.0e-13

Transcript
Transcript IDpfu_aug1.0_36000.1_70181.t1
Definition-
>pfu_aug1.0_36000.1_70181.t1
atgatagattctgcagaggtagtccgcgaattttggattattgatggacaacacatcgtctatgtatatattaaggacga
ggacgtcctaaaagctgttacaacggcacttgatgttggatatcggcacattgacaccgcatatgcctacttaaacgaag
aagctgttggggaagctttagatgggtatttacggacaggaaaggtatcacgagaggatctgtttatcgttacaaaggta
atgttttcacaaaagaaaacgctttactggaagattgtcagaaaaaagacgtttcaccgaataatactctatgcttgttc
aaattgcgaagcagagaacagtgataaaattttgcgtaggcttcagaaaaacactgacaccgatccaaaaaattccttaa
acagtcggaaaaacgtggtaaaactggccgttcgctag

Protein
Protein IDpfu_aug1.0_36000.1_70181.t1
Definition-
>pfu_aug1.0_36000.1_70181.t1
MIDSAEVVREFWIIDGQHIVYVYIKDEDVLKAVTTALDVGYRHIDTAYAYLNEEAVGEALDGYLRTGKVSREDLFIVTKV
MFSQKKTLYWKIVRKKTFHRIILYACSNCEAENSDKILRRLQKNTDTDPKNSLNSRKNVVKLAVR

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