Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_3614.1_01488
Locus scaffold3614.1 : 1 ... 31088 : +
To GenomeBrowser scaffold3614.1:1..31088
Genes list of scaffold scaffold3614.1
Synonym pfu_aug2.0_12041.1_06479

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_3614.1_01488.t1 gi|354487231|ref|XP_003505777.1| 4.0e-29

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
Dshape 1
maleGonad 1
pearlSac 1

Transcript
Transcript IDpfu_aug1.0_3614.1_01488.t1
Definition-
>pfu_aug1.0_3614.1_01488.t1
gccatacaatatggagatatttctcaaagacaccatcaaatataactgggagatgttagaaaagagagaggtgaatcctt
tggccaatggaaacttcaaggacttgccactgagaacaagagtagaaatcttacaatgtttgtgtgattaccgtctggat
gccacagatgtcatggaacaattgaagggtctagatggggacaatatgagagtggaaccacttggtaaggacagcacagg
caagacatattggtatttctatggtaacagattatactgtgagcatccagaacctgtcaaagaggaaccaaaatcggaaa
agaaagacaaaaaaggttccaagaagaaagaaaagaaaaaagagaagaaacagcagaaatcaaaaccaaagaaaggaaga
aagaaagctccagatccacctagaagaagctctcgtggtcgtatcctgaaaaattccaaatctttagaaattgatagatc
ggagacggagagtgaggaggaggaggaggaggacagctcatcagggtcagattcggagatggacataactctgtcagaaa
tatcggagagaaaaaagaacaacaagggaaaagactctggtagaaaaaagagaaagagtaatgaagatgatgaggatgaa
gaatcagatgaagaggatcgtcagataaaaaatcagaaacagagtgacaaggctccaaaaggaaaaggtagacaaaagaa
gactcccacccctaaaactccacaagcaacaaaatcaagcaagcctagtacatctactccagccaggcctgctagcacta
gatcttctcgaagaagcttaaggaatgcaaagaaagacgagttagagagcttatccaaagatgctgaaaaagatgaggag
aaagataatgataatgaagatgatgataatgatgataatgataacaaagatatagatgagaacagtatgatgagtgagag
tatagctgacagtacaaggattgatgaggagagagaaagtatcactgatgacagtacagaaaacaaagccagagataatg
ttacagctaaggaagaacaaagtgagacagataaagaggagggtaaagttacagatgatggtaataccaaagacaatgat
gttaaagaagagaacacaaacaattctaattgcaatggtgatgttgacaatacaccagaggaagaggataaaaatgatgt
aaagaaagatgatgaacctaaagaagataggattccgctatgtttacatcctgtagatcctgacactaggtggcgcttga
tctgtgaaacattcgaggattggcaggctttatcggagatgtttaaggacagtaaagtgaagtcagagaaggagctatat
aaatgtatcatagaagatttcttaccagcaatcccagatataatggtcgccaggttatttcatttacgtgtagaatttaa
cattgtgtaa

Protein
Protein IDpfu_aug1.0_3614.1_01488.t1
Definition-
>pfu_aug1.0_3614.1_01488.t1
PYNMEIFLKDTIKYNWEMLEKREVNPLANGNFKDLPLRTRVEILQCLCDYRLDATDVMEQLKGLDGDNMRVEPLGKDSTG
KTYWYFYGNRLYCEHPEPVKEEPKSEKKDKKGSKKKEKKKEKKQQKSKPKKGRKKAPDPPRRSSRGRILKNSKSLEIDRS
ETESEEEEEEDSSSGSDSEMDITLSEISERKKNNKGKDSGRKKRKSNEDDEDEESDEEDRQIKNQKQSDKAPKGKGRQKK
TPTPKTPQATKSSKPSTSTPARPASTRSSRRSLRNAKKDELESLSKDAEKDEEKDNDNEDDDNDDNDNKDIDENSMMSES
IADSTRIDEERESITDDSTENKARDNVTAKEEQSETDKEEGKVTDDGNTKDNDVKEENTNNSNCNGDVDNTPEEEDKNDV
KKDDEPKEDRIPLCLHPVDPDTRWRLICETFEDWQALSEMFKDSKVKSEKELYKCIIEDFLPAIPDIMVARLFHLRVEFN
IV

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495