Gene
| Gene Model ID | pfu_aug1.0_362.1_15039 |
|---|---|
| Locus | scaffold362.1 : 59735 ... 69775 : - |
| To GenomeBrowser | scaffold362.1:59735..69775 |
| Genes list of scaffold | scaffold362.1 |
| Synonym | pfu_aug2.0_269.1_30535 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_362.1_15039.t1 | 1 | 1 | Glutaminase | 120 | 406 | 0.0 | 378.3 | 0.0 | 0.0 | 377.8 |
| pfu_aug1.0_362.1_15039.t1 | 1 | 1 | Ank_2 | 437 | 517 | 4.0e-09 | 36.6 | 4.6e-12 | 1.1e-08 | 35.2 |
| pfu_aug1.0_362.1_15039.t1 | 1 | 1 | Ank_4 | 438 | 481 | 7.3e-08 | 32.7 | 1.2e-10 | 3.0e-07 | 30.7 |
| pfu_aug1.0_362.1_15039.t1 | 1 | 1 | Ank_5 | 455 | 496 | 1.0e-05 | 25.5 | 1.1e-08 | 2.8e-05 | 24.1 |
| pfu_aug1.0_362.1_15039.t1 | 1 | 1 | Ank | 461 | 493 | 9.0e-08 | 31.5 | 1.1e-10 | 2.7e-07 | 30.0 |
| pfu_aug1.0_362.1_15039.t1 | 1 | 1 | Ank_3 | 461 | 488 | 6.0e-06 | 25.9 | 9.2e-09 | 2.3e-05 | 24.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_362.1_15039.t1 | gi|224055887|ref|XP_002191448.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 5 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 2 |
Transcript
| Transcript ID | pfu_aug1.0_362.1_15039.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_362.1_15039.t1 atgagtgaggaactagactggaaagcggaagattttgaggacaggttatttgatacacttgcagattcagatggaagagt gctgattaaaaaattcaaaaagatcctgcatgaaacaggattacgggacagtgaccctcgtcttaaacaatgcatgaaca actttaaaaaggttcaaacgacatcagaaagcggagaacatggcgggacggtggacaggaaatcctttaaggaatgcatt tcggacaatattatgctaatatccaaagctgtaaaaaattctttcatcataccagatttcagcgacttcaaagatatcat ccacaagctctacttggaatgcaaatcaaaaacaggtggccaggtggcttcatacataccccagctggcaaggtacagtc cagaattatgggcagtgtccatttgtacaatagacggacaaagatactcaataggagacgttaatgtgccattttgtctt cagtcaaccagtaagcctttgacatatgccctcgctcagaatgagtatgaccccgactatgtccacaaatatgttggtca tgaacccagtggacgaagtttcaacgaaatctctctgaatatgcacaacaaaccacacaaccctatgatcaactctggag caatcatgatggcgtccctcgtcagaccagatctcaaaatggcagatagatatgactatatgtgcaactacatcaaaagg ttgacaggaggggaatacgtggctttcaacaacgctgtgtacttatcagaaaaagacaccgccgacagaaattttgcact aggatattacatgcgtgaaaataattgtttcccgcctggtacgaagttccaagagataatggaattttacttccagctct gttcaatagaagtaacatctgattcggcagccgtgattgctgctacccttgccaatggtggatattgtccaatcacagac gagaaaatattatctgcatcgtccgtccgtaacactctgtcgctgatgcattcatgtgggatgtatgattggtcaggaga atttgcttttactgttggtctgccggggaaatcgggcgtgtcagggtgtgtcctgttggtggtgcctaacgtgatgggta tttgtgtttggtcaccgccattggacaaatttggaaacagtgttagaggtgtacatttctgccagggtcttgttagcaac ttcaatttccatcagtttgacaaagttacatacgactccaagaaaattgacccgaccaaaaacaagttggagaacagagc tatggacgtgttcaatgtattgtttggtgctttcagtggtgacgtcactgctgtaagaaggtactacttgctgggaatag atatggacattcaggattacgatggtaggacagctttacatctcgctgcatcagagggtcatcttgatgttgtaaagttt ctcgcggagaaatgcaattgtgatccattttccaaagacagatggtcaaaccttccggtaaacgacgctgagaaatttgg acacgaagagatagccgcattattaaagaagtacatgaagacgtatataaaacaacagaaagaagggaaagaacggagag cctcattgcgtatcgattaa |
|
Protein
| Protein ID | pfu_aug1.0_362.1_15039.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_362.1_15039.t1 MSEELDWKAEDFEDRLFDTLADSDGRVLIKKFKKILHETGLRDSDPRLKQCMNNFKKVQTTSESGEHGGTVDRKSFKECI SDNIMLISKAVKNSFIIPDFSDFKDIIHKLYLECKSKTGGQVASYIPQLARYSPELWAVSICTIDGQRYSIGDVNVPFCL QSTSKPLTYALAQNEYDPDYVHKYVGHEPSGRSFNEISLNMHNKPHNPMINSGAIMMASLVRPDLKMADRYDYMCNYIKR LTGGEYVAFNNAVYLSEKDTADRNFALGYYMRENNCFPPGTKFQEIMEFYFQLCSIEVTSDSAAVIAATLANGGYCPITD EKILSASSVRNTLSLMHSCGMYDWSGEFAFTVGLPGKSGVSGCVLLVVPNVMGICVWSPPLDKFGNSVRGVHFCQGLVSN FNFHQFDKVTYDSKKIDPTKNKLENRAMDVFNVLFGAFSGDVTAVRRYYLLGIDMDIQDYDGRTALHLAASEGHLDVVKF LAEKCNCDPFSKDRWSNLPVNDAEKFGHEEIAALLKKYMKTYIKQQKEGKERRASLRID |
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