Gene
| Gene Model ID | pfu_aug1.0_362.1_15042 |
|---|---|
| Locus | scaffold362.1 : 94024 ... 141635 : - |
| To GenomeBrowser | scaffold362.1:94024..141635 |
| Genes list of scaffold | scaffold362.1 |
| Synonym | pfu_aug2.0_1404.1_15022 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_362.1_15042.t1 | 2 | 1 | TRAM_LAG1_CLN8 | 2 | 47 | 1.3e-18 | 67.2 | 3.5e-07 | 0.00048 | 19.7 |
| pfu_aug1.0_362.1_15042.t1 | 2 | 2 | TRAM_LAG1_CLN8 | 66 | 138 | 1.3e-18 | 67.2 | 1.4e-16 | 1.9e-13 | 50.3 |
| pfu_aug1.0_362.1_15042.t1 | 1 | 1 | Glutaminase | 264 | 421 | 0.0 | 183.7 | 0.0 | 0.0 | 183.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_362.1_15042.t1 | gi|291235981|ref|XP_002737917.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 2 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_362.1_15042.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_362.1_15042.t1 atgtttgtatattggcacaaggtctacaccgtgtatggcactccggacttcgaggccgtcggccatgtcaaatatgtact gtatatcacttgttccatcctagacttactgaatttgtattggttttacaaaatgtgtaaaggtttggtcaagactctga cacagagctctaatggtcagctggagcaaacctacggtgttgccgcttggtttgccaactatagactgttggcagaattt tcaaccctttttgtgaataacagatggtttttcgacaccctgaaaatgaaacgaacgcaaggtctaccattcataaacgg tgtgctgatgacactaacatttttcttcgcgcgaatcgtcaccatgccgccatattggtataaagtgtacacagtgtatg gaacggaggaattcgacgcagtgggtcacataaatgacgaggttgattggaaggttgaagacttcgaggacagactgttt gactcgttagcagacacaaatggaaggttactgataaacaaattcaagaaggtcctgcacgctactgggttacaagacaa tgatccacggctccgacaatgtatggagaacttcaaaaaggtggaatccagcacagaacatcacgagcatgggggaacaa cagtggataaagaaacattcaaagaatgtatttcggataacattatgctgatatcgagagccgtgaaaaattcattcatc ataccagatttcgatgatttcaaagccataatccatagcctatatcttgatgcaaaaaccaaaactggcggaaaagttgc atcgtatataccacagctagcaagatacagtccagaatattggggcgtgtccgtctgtacggtagatggtcaaagatact ctcttggagatgtagatatccccttctgtctacagtcttgcagtaaaccgctcacctatgccctcgctcagaatgatttt accccagattacgtacataagtatgtaggtcacgaacccagtggaagaagtttcaatgaaatcagcctcaatctgcacaa caagccgcacaatccgatgataaactccggagcaatccttgtggcctcactcattcgtccggatctcaaaatggcagata gatttgactatataactaattatttcaagaaattaacaggaggggagtttgtcgcatttaacaactctgtatacttgtca gaaaaggacactgcggataggaactttgctcttgggtactacatgcgagagaacgacagccttgttggcaacttcaactt tcatcagtttgatagcgtcgcacacaatccgaagaaaatcgacccgaccaaaaacaaactggaaaacaaagccatggatg tcgttaatgtcctttttggtgcttttagcggcgatgttactgctgtgagaagcgaagagttagattggaaggttgaggac tttgaagaccggctgttcgataccttagccgactctgatggcagattgctggtaaaaaaattcaaaaaggtactgcatga aacaggtctacgagacaatgatccacgtttgcgacaatgcatgaacaatttcaaaaaagcacagaacagttcagataacg tagaacaaggtggaactgtggataggaaaacgttcagagaatgcatttcggacaatattatgctgatatccagagcggtg aagaactcgtttatcatcccagatttcaacgacttcaaggatatcatccacaagctgtacctggaatgcaaatcaaaaac cggcggcaagggcttgcgcaatcttgagcgcgaagagttagattggaaggttgaggactttgaagaccggctgttcgata ctttagccgactctgatggcagattgctggtaaagaaattcaaaaaggtactgcatgaaacaggtctacgagataatgat ccacgtttgcgacaatgcatgaacaatttcaaaaaagcacagaacagttcagataacgtagaacagggtggaacggtgga taggaaaacgttcagagaatgtatttcggacaatattatgctgatatccagagcggtaaagaattcgttcatcatcccag atttcaacgacttcaaggatatcatccacaagctgtacctggaatgtaaatcaaaaaccggcggcaaggtagataatttc tcttcttttaaaaattttacataa |
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Protein
| Protein ID | pfu_aug1.0_362.1_15042.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_362.1_15042.t1 MFVYWHKVYTVYGTPDFEAVGHVKYVLYITCSILDLLNLYWFYKMCKGLVKTLTQSSNGQLEQTYGVAAWFANYRLLAEF STLFVNNRWFFDTLKMKRTQGLPFINGVLMTLTFFFARIVTMPPYWYKVYTVYGTEEFDAVGHINDEVDWKVEDFEDRLF DSLADTNGRLLINKFKKVLHATGLQDNDPRLRQCMENFKKVESSTEHHEHGGTTVDKETFKECISDNIMLISRAVKNSFI IPDFDDFKAIIHSLYLDAKTKTGGKVASYIPQLARYSPEYWGVSVCTVDGQRYSLGDVDIPFCLQSCSKPLTYALAQNDF TPDYVHKYVGHEPSGRSFNEISLNLHNKPHNPMINSGAILVASLIRPDLKMADRFDYITNYFKKLTGGEFVAFNNSVYLS EKDTADRNFALGYYMRENDSLVGNFNFHQFDSVAHNPKKIDPTKNKLENKAMDVVNVLFGAFSGDVTAVRSEELDWKVED FEDRLFDTLADSDGRLLVKKFKKVLHETGLRDNDPRLRQCMNNFKKAQNSSDNVEQGGTVDRKTFRECISDNIMLISRAV KNSFIIPDFNDFKDIIHKLYLECKSKTGGKGLRNLEREELDWKVEDFEDRLFDTLADSDGRLLVKKFKKVLHETGLRDND PRLRQCMNNFKKAQNSSDNVEQGGTVDRKTFRECISDNIMLISRAVKNSFIIPDFNDFKDIIHKLYLECKSKTGGKVDNF SSFKNFT |
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