Gene
Gene Model ID | pfu_aug1.0_3626.1_30476 |
---|---|
Locus | scaffold3626.1 : 6326 ... 11864 : + |
To GenomeBrowser | scaffold3626.1:6326..11864 |
Genes list of scaffold | scaffold3626.1 |
Synonym | pfu_aug2.0_321.1_04002 |
Manual annotation
Study field | Reproduction |
---|---|
Gene name | Pifuc-nanos-like B |
Description | Reciprocal BLASTP best hit to NCBI Accession AAT94169 (Nasonia vitripennis). |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_3626.1_30476.t1 | 1 | 1 | zf-nanos | 194 | 247 | 7.2e-24 | 83.5 | 3.2e-27 | 1.2e-23 | 82.8 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_3626.1_30476.t1 | gi|201023298|ref|NP_001128394.1| | protein nanos [Nasonia vitripennis] | 4.0e-19 |
Transcript
Transcript ID | pfu_aug1.0_3626.1_30476.t1 |
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Definition | - |
>pfu_aug1.0_3626.1_30476.t1 atgccaggtcccaagcacagtgctgttgacaatctggagaagctatgtcgcctcagtgtcttggactctatggatgatga aaatgttggtcccattgaccttaatggtgacgcacattccgacacgtcttcatcaagcggacatgagcacctcaaccagc cccttctagtggactaccctaatggtgaccagttctactccgatgatggttgtatgcccgcagtcacaatgcaagccagt ccagggtttcaagacttcgtccttcccatgaggccagtcaacagaagaagcaatggtttccatagcaacaattcacagag cagcagtatgtctgacattgctaaccaatctaatggtaactatggtaaccattccaatggtaactatagcaaccagtcca atggtaactttgctaaccagtccaatggtaactttgctaaccagtccaatggtaacttgcagacagttggcagtgtgttg ggtgcgatccaggagctccttcagaacagcgatcctgatgctctgattgaacctgggttgctgaatccacaaagacgcat gcgcttcgaggagaaatactgtgccctgtgcaagaagaatggggaaacccgagagttctataccactcatgttctgaaag acaatcgtggaaaagtgatatgcccgatcctcaggaaatactcgtgtcccaagtgtggtgccaccggggataacgctcac actctgcgacactgcccgatcacacgcggcacagaccagcagtctgtcatggagaccatcaaaaccccccgcagcagctg tggaaggcgattctag |
Protein
Protein ID | pfu_aug1.0_3626.1_30476.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3626.1_30476.t1 MPGPKHSAVDNLEKLCRLSVLDSMDDENVGPIDLNGDAHSDTSSSSGHEHLNQPLLVDYPNGDQFYSDDGCMPAVTMQAS PGFQDFVLPMRPVNRRSNGFHSNNSQSSSMSDIANQSNGNYGNHSNGNYSNQSNGNFANQSNGNFANQSNGNLQTVGSVL GAIQELLQNSDPDALIEPGLLNPQRRMRFEEKYCALCKKNGETREFYTTHVLKDNRGKVICPILRKYSCPKCGATGDNAH TLRHCPITRGTDQQSVMETIKTPRSSCGRRF |