Gene
| Gene Model ID | pfu_aug1.0_3626.1_30476 |
|---|---|
| Locus | scaffold3626.1 : 6326 ... 11864 : + |
| To GenomeBrowser | scaffold3626.1:6326..11864 |
| Genes list of scaffold | scaffold3626.1 |
| Synonym | pfu_aug2.0_321.1_04002 |
Manual annotation
| Study field | Reproduction |
|---|---|
| Gene name | Pifuc-nanos-like B |
| Description | Reciprocal BLASTP best hit to NCBI Accession AAT94169 (Nasonia vitripennis). |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3626.1_30476.t1 | 1 | 1 | zf-nanos | 194 | 247 | 7.2e-24 | 83.5 | 3.2e-27 | 1.2e-23 | 82.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3626.1_30476.t1 | gi|201023298|ref|NP_001128394.1| | protein nanos [Nasonia vitripennis] | 4.0e-19 |
Transcript
| Transcript ID | pfu_aug1.0_3626.1_30476.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3626.1_30476.t1 atgccaggtcccaagcacagtgctgttgacaatctggagaagctatgtcgcctcagtgtcttggactctatggatgatga aaatgttggtcccattgaccttaatggtgacgcacattccgacacgtcttcatcaagcggacatgagcacctcaaccagc cccttctagtggactaccctaatggtgaccagttctactccgatgatggttgtatgcccgcagtcacaatgcaagccagt ccagggtttcaagacttcgtccttcccatgaggccagtcaacagaagaagcaatggtttccatagcaacaattcacagag cagcagtatgtctgacattgctaaccaatctaatggtaactatggtaaccattccaatggtaactatagcaaccagtcca atggtaactttgctaaccagtccaatggtaactttgctaaccagtccaatggtaacttgcagacagttggcagtgtgttg ggtgcgatccaggagctccttcagaacagcgatcctgatgctctgattgaacctgggttgctgaatccacaaagacgcat gcgcttcgaggagaaatactgtgccctgtgcaagaagaatggggaaacccgagagttctataccactcatgttctgaaag acaatcgtggaaaagtgatatgcccgatcctcaggaaatactcgtgtcccaagtgtggtgccaccggggataacgctcac actctgcgacactgcccgatcacacgcggcacagaccagcagtctgtcatggagaccatcaaaaccccccgcagcagctg tggaaggcgattctag |
|
Protein
| Protein ID | pfu_aug1.0_3626.1_30476.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3626.1_30476.t1 MPGPKHSAVDNLEKLCRLSVLDSMDDENVGPIDLNGDAHSDTSSSSGHEHLNQPLLVDYPNGDQFYSDDGCMPAVTMQAS PGFQDFVLPMRPVNRRSNGFHSNNSQSSSMSDIANQSNGNYGNHSNGNYSNQSNGNFANQSNGNFANQSNGNLQTVGSVL GAIQELLQNSDPDALIEPGLLNPQRRMRFEEKYCALCKKNGETREFYTTHVLKDNRGKVICPILRKYSCPKCGATGDNAH TLRHCPITRGTDQQSVMETIKTPRSSCGRRF |
|