Gene
| Gene Model ID | pfu_aug1.0_3628.1_66754 |
|---|---|
| Locus | scaffold3628.1 : 56727 ... 61495 : - |
| To GenomeBrowser | scaffold3628.1:56727..61495 |
| Genes list of scaffold | scaffold3628.1 |
| Synonym | pfu_aug2.0_405.1_17397 |
Manual annotation
| Study field | other developmental genes |
|---|---|
| Gene name | sprouty |
| Description | Best hit to Ixodes scapularis sprouty, putative, mRNA.BLAST hits to various sprouty genes from various bilaterians. |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3628.1_66754.t1 | 1 | 1 | Sprouty | 130 | 244 | 5.9e-21 | 74.5 | 6.7e-25 | 9.9e-21 | 73.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3628.1_66754.t1 | gi|148231127|ref|NP_001082238.1| | sprouty homolog 2 [Xenopus laevis] | 5.0e-32 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_3628.1_66754.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3628.1_66754.t1 atgagatcttccagaaatagcggcacccgccaactgccacctccggatgcgggaatagaacgtgtaattacgcttgacca gataagaccgcatccccgcattcagaatgagtatgtggacggaccaaaagtacccgttcatggcagtttgaagcctcata ttccaggaggaagtttaagcacaactacctcgcatcgtgtggccctacctgttcgtgctaatactgtgccccatacagta tccagtgttcgtgcattgaacccaaatttcggacttataacacctataagtacgcaaccaacccctctgacaactccttt gaaaaaggacttggtagagccagctgtaacagagaatgatgatgaaattatatgttccaaatgcggaaaatgtaaatgtg gctcatgtacagagccacaagcgttaccgtcgaaatggctgtgtggagactcttgtcaagtgagccccgaagcggcgata gaaacttgtacttgtttttgttgtgtcaaaggacttttttaccactggggcaaagatgagcaggaaggggacagtttgtg ttacatggacccctgtgcttgtcttggaaagccacattgttgcaaaagatggacatgtatggggtgcatggcattgtgct taccgtgcctgtgctgttattggccagcgagaggagcgttgaaggcatgcacgttatgttacaataagtgcaggaaaaaa ggttgccaatgtgcgaaaagtaataagcctagtaagaaaatttcggatttcaaaagtaaaaacgggtcaaattcgcaatg tcgagggctcttaattgagtcggactccagcagtgcttaa |
|
Protein
| Protein ID | pfu_aug1.0_3628.1_66754.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3628.1_66754.t1 MRSSRNSGTRQLPPPDAGIERVITLDQIRPHPRIQNEYVDGPKVPVHGSLKPHIPGGSLSTTTSHRVALPVRANTVPHTV SSVRALNPNFGLITPISTQPTPLTTPLKKDLVEPAVTENDDEIICSKCGKCKCGSCTEPQALPSKWLCGDSCQVSPEAAI ETCTCFCCVKGLFYHWGKDEQEGDSLCYMDPCACLGKPHCCKRWTCMGCMALCLPCLCCYWPARGALKACTLCYNKCRKK GCQCAKSNKPSKKISDFKSKNGSNSQCRGLLIESDSSSA |
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