Gene
| Gene Model ID | pfu_aug1.0_3631.1_23368 |
|---|---|
| Locus | scaffold3631.1 : 1 ... 27385 : - |
| To GenomeBrowser | scaffold3631.1:1..27385 |
| Genes list of scaffold | scaffold3631.1 |
| Synonym | pfu_aug2.0_3184.1_15730 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3631.1_23368.t1 | 2 | 1 | GFO_IDH_MocA | 3 | 76 | 5.9e-35 | 120.3 | 2.3e-09 | 6.8e-06 | 26.6 |
| pfu_aug1.0_3631.1_23368.t1 | 2 | 1 | F420_oxidored | 5 | 66 | 2.2e-07 | 31.1 | 5.1e-05 | 0.15 | 12.4 |
| pfu_aug1.0_3631.1_23368.t1 | 2 | 2 | GFO_IDH_MocA | 201 | 319 | 5.9e-35 | 120.3 | 1.5e-29 | 4.4e-26 | 91.7 |
| pfu_aug1.0_3631.1_23368.t1 | 2 | 2 | F420_oxidored | 204 | 275 | 2.2e-07 | 31.1 | 2.6e-06 | 0.0078 | 16.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3631.1_23368.t1 | gi|47550751|ref|NP_999900.1| | dihydrodiol dehydrogenase (dimeric), like [Danio rerio] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3631.1_23368.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3631.1_23368.t1 atgaagataaagtgggggatatgtggagctggtagtataagcaaagacttctgttacgctgtgaaagccctaccacaaga tgaacacgaggtcgtcgcaatagcttcatcatcaattgatcgagctcttgatttcgctcgaaagcatggcattcaacaat catatagctatgacgatatggctaaagacaacgatataggtgtcgatgacgattgctgcatcattttgccatacgacaat ggagcaaaagccagtttatccttcagtggcaagggtcacagtctaagtcctgtagctgtatttggtacaaaaggatgcat cactataccaaactatctatggtgtccaacagaagcaacaattccttctggcaaaatatcatatccattaaaaccggagg atccatcggtgtatacgtaccctaatggcatgggaatggggtatgaagccaacgaaaactgcaatacaccatacacatat tcgatcatcattgattttattgtcttaaatgtaggtttatctgaaagtcccctggtcacctacgaggatacgattgccac ctatgagataatggacgagaatactgatttagagatgaaattaaagtggggactatgtggagccggtaacattaccaacg acttttgccatgctctgcgaacattaccagaggaacaacatgaggtggttgcaatagcttcatcgtccagtgatcgagca caggaatttgccgaaatacatgggattgacagagcatatggtagttatcatgatatagcaaaagataaggatgtcgatgt tgtatacattggaacttggcatacaaatcatgtgttcctatcaaagctaatgctcaatgctggtaaacatgttctttgtg agaagcccatgtgccttaatgttgatcaggtgaaggaagtgtttcaagtggccaaagagaacaagaaactctttatggag gctgtttggagtagagcttttccaatttaccaaagtattcaagatgaactaaaaagtggaagtgtcggaaacgttcagtt agtaacggctacattttgtgtaccggcaagtgagcatcctgtgtggaaagactaccctggcttcgggatgcttcttatca taggaatatatcctattcagtttgcaaattggatttatggtaacatgaaaccaaaatctatcacggcagtcggatcacta gggaagaacggtgttgatgaagattgctgcgtcattttgtcatacgaaaatggagcgaaagccaatttgtcatacagcgg aaaatgtcaatcactgaatcctggaatagtgtatggttccaagggatgcatacattttcaatatcatcagaatattcagt ccgacccatatgaacatactcagttgttaaaactatcaaataaaaaggcatag |
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Protein
| Protein ID | pfu_aug1.0_3631.1_23368.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3631.1_23368.t1 MKIKWGICGAGSISKDFCYAVKALPQDEHEVVAIASSSIDRALDFARKHGIQQSYSYDDMAKDNDIGVDDDCCIILPYDN GAKASLSFSGKGHSLSPVAVFGTKGCITIPNYLWCPTEATIPSGKISYPLKPEDPSVYTYPNGMGMGYEANENCNTPYTY SIIIDFIVLNVGLSESPLVTYEDTIATYEIMDENTDLEMKLKWGLCGAGNITNDFCHALRTLPEEQHEVVAIASSSSDRA QEFAEIHGIDRAYGSYHDIAKDKDVDVVYIGTWHTNHVFLSKLMLNAGKHVLCEKPMCLNVDQVKEVFQVAKENKKLFME AVWSRAFPIYQSIQDELKSGSVGNVQLVTATFCVPASEHPVWKDYPGFGMLLIIGIYPIQFANWIYGNMKPKSITAVGSL GKNGVDEDCCVILSYENGAKANLSYSGKCQSLNPGIVYGSKGCIHFQYHQNIQSDPYEHTQLLKLSNKKA |
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