Gene
Gene Model ID | pfu_aug1.0_3633.1_52047 |
---|---|
Locus | scaffold3633.1 : 65550 ... 71945 : - |
To GenomeBrowser | scaffold3633.1:65550..71945 |
Genes list of scaffold | scaffold3633.1 |
Synonym | pfu_aug2.0_1142.1_08191 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_3633.1_52047.t1 | 1 | 1 | C1q | 32 | 153 | 1.1e-25 | 90.0 | 9.1e-30 | 1.3e-25 | 89.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_3633.1_52047.t1 | gi|194673435|ref|XP_001788795.1| | 9.0e-14 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
mantle | 1 |
Transcript
Transcript ID | pfu_aug1.0_3633.1_52047.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3633.1_52047.t1 atggtgtctgacgtgtcttccggtcaaagtaaagcagaatggacacttcaaaccttaagcggtattttgtgcaagagaga ctatcagcgtgttgctttttctgctaatttgaaatcccactacaccactcagggcaacgatcatctggtcttcgcaaatg taatagcgaatgttggtggggactacgatcctactactggtacatttacatgccgagtccctggtctgtatcagttcagt tggatgatacatcagacgaaaggacgcgcgaacagccatttctacttagtgcgtaacaacgatgttgcgtttacgatgta tcacacaggttcaaatgataatatagcttgcacaacctatcttcaactgaagtatggcgacactgtctggcttaaggcgt atgaagcaggtcgaacaatatttgcaaacaattatacgacgtttggcggaatgctggtttaa |
Protein
Protein ID | pfu_aug1.0_3633.1_52047.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3633.1_52047.t1 MVSDVSSGQSKAEWTLQTLSGILCKRDYQRVAFSANLKSHYTTQGNDHLVFANVIANVGGDYDPTTGTFTCRVPGLYQFS WMIHQTKGRANSHFYLVRNNDVAFTMYHTGSNDNIACTTYLQLKYGDTVWLKAYEAGRTIFANNYTTFGGMLV |