Gene
| Gene Model ID | pfu_aug1.0_3638.1_23375 |
|---|---|
| Locus | scaffold3638.1 : 17530 ... 45123 : - |
| To GenomeBrowser | scaffold3638.1:17530..45123 |
| Genes list of scaffold | scaffold3638.1 |
| Synonym | pfu_aug2.0_150.1_00325 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3638.1_23375.t1 | 2 | 1 | IBN_N | 2 | 63 | 5.8e-08 | 32.5 | 5.2e-10 | 1.9e-06 | 27.6 |
| pfu_aug1.0_3638.1_23375.t1 | 3 | 1 | Xpo1 | 44 | 192 | 3.3e-12 | 46.5 | 9.0e-16 | 3.3e-12 | 46.5 |
| pfu_aug1.0_3638.1_23375.t1 | 3 | 2 | Xpo1 | 241 | 259 | 3.3e-12 | 46.5 | 0.15 | 550.0 | 0.3 |
| pfu_aug1.0_3638.1_23375.t1 | 2 | 2 | IBN_N | 349 | 383 | 5.8e-08 | 32.5 | 0.14 | 530.0 | 0.6 |
| pfu_aug1.0_3638.1_23375.t1 | 3 | 3 | Xpo1 | 476 | 510 | 3.3e-12 | 46.5 | 0.29 | 1100.0 | -0.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3638.1_23375.t1 | gi|338718452|ref|XP_001918271.2| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3638.1_23375.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3638.1_23375.t1 atatgtgaagaatttaaggaaacttcacccatgtgtgtacctgttggtctatttctggcacagaccgtacataaacctat cgttaggcattttggtttgcagttattggaacatgttataaagtttcgatggaacgatatgacacaggaccaaaaagact acctgaaagaaaatgcattggagcttatagcagtagaaacccagacagagttggtgttgaagatttatctgagggttgta gaggatgctgtgctgttccagaccatacccaatcagagacggagagaaataatgctggccctcacatccaacatggacga cctcttcagcttctttgttacagtgttaaaagaacacactgatgctgtagatcaaatacaaaagtctggacaaacagttg atcccaaggtgattcaggaacacaacatggccagtgaggcagctctgtgtacattggctggttaccttgactgggtccac atgcagcatatcatggcaaaaaacgctctgctgctccagatgacctgtctgctgcttagcaacagtagtctgcaacttta tgctgcagagtgtctccatattattgttagtagaaggggaaaattggaagataggaagcctcttctggttctcttcagtg aagatgccatgaatattgttcttcgtacagtagcggatgcagaggctgcctcctctacagatgagtactactacctgttc cttaagaagctctgtctactgctggtggaacttggtaaacagctggcagctttatggggaaacctaccagaagttggcca acctcagaatttttccacctacctagaggctgtatttgcctttacacagcatccaagcaggatgctgtgtagctacacac agcctttatgggcgttatttttccgacatgatcacatgtccaaagatcctatactcttgtctttcatcccaaggttgatc caggggacacatagcacacttgtcaaggctggattccctacacagaataacagtccaagctgtgaatattccagacatga ttttgacagtgatgatgactttcatcaattcttgttaaaattgaggtcagaaatctcagagacgttacgtcttgcggcag ttttacagccttcaccagctatagcttatgcttttgattggttgaaatcacagctcacaaaacctattgatacaggagga ggaaaggattattgtaccctgttttctccgtctttcctggaatgggatgccatgacagtatgtttggagtgtgtgattag taaactctccaaccctaaatctataccagaattaagtactggtgtactactgttaaatgaagtgctaaattatcagactc agatattttctgctgtaacgttcaaccaagaaggtcagacaaagtccacacggagtagagccgttaaaaatgtacgacaa catgcctgctctatattggtcaaaatgtgtaaacaatatgctgatctcatctttccagtatttgatcagctgtacagcca tatcaaaactatcagcagtgatgcagagggacttagtcagatggaaaaatgtatactgatggaagctctcatactcataa gcaacaagagcaataacttcatgaagcagtcagagtttcttgaagaaatactcagaccagtgaaggaatattatttgtcc aaagaattcacagaaacaatgaatgcagtatggcagcctcagtatttacaaaaacggcatcctgccttttcacggacgta tgaattattggaaaatgaaaaattagcaatattaggtatgccagctccatgtgtagatataacagtcaaccagaataaac ttccgtcagacagaatgcaaaacttcattgtcactacaaatgataataatgtggaaggagcagaagataacatggaggcc caagaagtgatagaggatcaacttacacgacaactcaacagagaatatatggaactactggccactgcacttcatatgag gagaaacgaggttgtagccaatgtagaggaagacagaatggatgatatagagaatcctagtgctgtacagaaagaggagg tggcattgtccaaactcggatgtctctgtatgttaaataagtctgtctatccatccatcatgatgtacgtcttcagtgcg ttaacgtggacagattatgtggcatgccttagaggatgtaacttagcctgctctatgatgaaacagttggttgccaatgg tgacgctacatcagacattgccggcagctttttctatcaggtattgtgtgggttacaggtgcatggacagcatgaagggt cacagtcttcattgctgaatttggccctcaaactctatgaacttttgagacctgcattcccagagataaaaaatgtctta ctccagatcccaaacatcaaagagcaggatattcagagctttgatgaaaagatgatcttcataaaaaacccaaagcaagg agttgcagaaaagaaaaagaaggatagttttaagcgtttggtgtcagaagttatagggaagagtataggtcaacagttta aaagggaggctcagtacaggaatcttcctccaatcttcagaatcagacctccaaaagaagatataatgaagaaacaagaa gatactggtctttggtcattatttaatccatccaatggccacaatgtatga |
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Protein
| Protein ID | pfu_aug1.0_3638.1_23375.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3638.1_23375.t1 ICEEFKETSPMCVPVGLFLAQTVHKPIVRHFGLQLLEHVIKFRWNDMTQDQKDYLKENALELIAVETQTELVLKIYLRVV EDAVLFQTIPNQRRREIMLALTSNMDDLFSFFVTVLKEHTDAVDQIQKSGQTVDPKVIQEHNMASEAALCTLAGYLDWVH MQHIMAKNALLLQMTCLLLSNSSLQLYAAECLHIIVSRRGKLEDRKPLLVLFSEDAMNIVLRTVADAEAASSTDEYYYLF LKKLCLLLVELGKQLAALWGNLPEVGQPQNFSTYLEAVFAFTQHPSRMLCSYTQPLWALFFRHDHMSKDPILLSFIPRLI QGTHSTLVKAGFPTQNNSPSCEYSRHDFDSDDDFHQFLLKLRSEISETLRLAAVLQPSPAIAYAFDWLKSQLTKPIDTGG GKDYCTLFSPSFLEWDAMTVCLECVISKLSNPKSIPELSTGVLLLNEVLNYQTQIFSAVTFNQEGQTKSTRSRAVKNVRQ HACSILVKMCKQYADLIFPVFDQLYSHIKTISSDAEGLSQMEKCILMEALILISNKSNNFMKQSEFLEEILRPVKEYYLS KEFTETMNAVWQPQYLQKRHPAFSRTYELLENEKLAILGMPAPCVDITVNQNKLPSDRMQNFIVTTNDNNVEGAEDNMEA QEVIEDQLTRQLNREYMELLATALHMRRNEVVANVEEDRMDDIENPSAVQKEEVALSKLGCLCMLNKSVYPSIMMYVFSA LTWTDYVACLRGCNLACSMMKQLVANGDATSDIAGSFFYQVLCGLQVHGQHEGSQSSLLNLALKLYELLRPAFPEIKNVL LQIPNIKEQDIQSFDEKMIFIKNPKQGVAEKKKKDSFKRLVSEVIGKSIGQQFKREAQYRNLPPIFRIRPPKEDIMKKQE DTGLWSLFNPSNGHNV |
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