Gene
| Gene Model ID | pfu_aug1.0_3642.1_52052 |
|---|---|
| Locus | scaffold3642.1 : 308 ... 4245 : - |
| To GenomeBrowser | scaffold3642.1:308..4245 |
| Genes list of scaffold | scaffold3642.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3642.1_52052.t1 | 1 | 1 | 7tm_1 | 10 | 198 | 2.0e-16 | 59.9 | 1.2e-19 | 2.5e-16 | 59.6 |
| pfu_aug1.0_3642.1_52052.t1 | 1 | 1 | 7TM_GPCR_Srw | 32 | 224 | 4.9e-09 | 35.7 | 2.3e-10 | 4.9e-07 | 29.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3642.1_52052.t1 | gi|193667014|ref|XP_001946215.1| | 1.0e-11 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3642.1_52052.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3642.1_52052.t1 atggatttgtgtgtgctttacatcggactttgccggctttgggtggcgcagctgacaggctttgacgtcaaggatacctc caatgtgctgtgtaaatttgttatatttgtaggctatgtctcaagttattcctctacttggctcatagtggcagttactt tggaaagatgcatagcagtaaggaaaccactgaaggtgttactcatatgcaagtatgttcgagctaagtacgtcgtagct gccatcattggaatggcatgtttggcgaacgtccacttcttttggaccatctccctgacagatatcaacggcagcttact ttgcagtgcatccattcaatgtgtcacctggatagacaggatttggccatggatagatgccgtcatatactctgtgtctc cttttgtcatattgataactttgaatacgttaatgataataaaagtctgtaaagcgaagcggaaaagacaaagtctgcat gaaagtcagaaccgatctggtcgagaaaaagccgcaaaactacctttaatgcttctgactatttccataacctttcttct tacaacacttcctttgaatgctgttgtaatctcgggtagattctggatttccttttcagaagaaaagggacatatatatt tgtatactcttatgaaaaatgtaacagagttaataataaacaaagattctgattggccgagaaattgtgttgataccctc atcaaccgacaccggaagtacgcgcttagcaacgtcataagcaacgtcgttggcaacacaatttcaaagctgcgaaaaaa cgttgaaacacgacaaaatgaaatgataagtaatcagagtaatatttatttggttgatcgaggtatcaacaccaaaaatt ga |
|
Protein
| Protein ID | pfu_aug1.0_3642.1_52052.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3642.1_52052.t1 MDLCVLYIGLCRLWVAQLTGFDVKDTSNVLCKFVIFVGYVSSYSSTWLIVAVTLERCIAVRKPLKVLLICKYVRAKYVVA AIIGMACLANVHFFWTISLTDINGSLLCSASIQCVTWIDRIWPWIDAVIYSVSPFVILITLNTLMIIKVCKAKRKRQSLH ESQNRSGREKAAKLPLMLLTISITFLLTTLPLNAVVISGRFWISFSEEKGHIYLYTLMKNVTELIINKDSDWPRNCVDTL INRHRKYALSNVISNVVGNTISKLRKNVETRQNEMISNQSNIYLVDRGINTKN |
|