Gene
| Gene Model ID | pfu_aug1.0_36495.1_70190 |
|---|---|
| Locus | scaffold36495.1 : 1 ... 16539 : + |
| To GenomeBrowser | scaffold36495.1:1..16539 |
| Genes list of scaffold | scaffold36495.1 |
| Synonym | pfu_aug2.0_858.1_27848 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_36495.1_70190.t1 | 2 | 1 | FNIP_M | 99 | 127 | 1.0e-17 | 64.5 | 0.004 | 59.0 | 3.1 |
| pfu_aug1.0_36495.1_70190.t1 | 2 | 2 | FNIP_M | 130 | 172 | 1.0e-17 | 64.5 | 2.4e-20 | 3.6e-16 | 59.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_36495.1_70190.t1 | gi|55925634|ref|NP_776114.2| | folliculin-interacting protein 1 [Mus musculus] | 7.0e-13 |
Transcript
| Transcript ID | pfu_aug1.0_36495.1_70190.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_36495.1_70190.t1 agatgagatggtattgacaaaagtcttcattcctacgtgcaataatcagaagagagagtcccatggaagagacagtgacc ttgagctggattctttttcaccacccatccactctgacacagatttatcatgtccacgccttatctcaaacagcgaaaga tctataggatctattgctcaaagtgtgccagtagatgtaccttcacctaaaagtgccaaatttgacatttttgatagaga cagcggtttagcctcaaaaattctttatgttgaaaagataaaggtatcaggaaactccagttctggttcaccacgcccta aacacaccaaggttgccatggggatcctgtttgggttgtgtgatgatgagaaagctacagagaacaaccatgacttatac ggtgctataggataccctattaaagttgcaaggacagttatcgtagggaaaaaagtagatctagtcaaaaagctactgta catacttacttactttattcgctgtagtgatgttcaaaataaagatttgtcatctctcgaaaatttcatagatgaagtga gtctggactccccattggatgataaatctgttattacgcccattgaagaagtagccaatcagagcttagagcaaaatgtt atgcaaagctcaaactgtagcgataaaatgcagggaagttgtgatacattaacagatgattacagtgttactggtgataa tttaaggcacgaatctgtgatatcaacttacgagggtagttatttaatacagggagattctcaaacatccggcatttcac aaacaaattataacagtcaagagccttccaatgtaaggccgaactctttaccgttaagtaagcaagattccgaaaagtgc cggaagagtattggaagtggaactgatcacaaggatgtggcattattttgtgatagcataaattcggatgaaggctactg ttcaatagtgcaatcctccaatgactatgataaggagaaatctcagttaccatgccgattgtcagattcagaggtcaggg aagatgtgaaggtagtaaatgttcatcatgtgtcaaaggcagttctacttaaagagacgcattcaatggaggcattagac acctgtggttcaccacattcctccccgaataaaagaactaagtccatgcttacagagaaactctcaaacaaaagtgggca ggaatctcgtgtacccacttcagaaatccgtcaaaggttcttaaaggaaggcagccatagcatatttaatgaatatttcg atgacgagagtatagaagcaaaaacca |
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Protein
| Protein ID | pfu_aug1.0_36495.1_70190.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_36495.1_70190.t1 DEMVLTKVFIPTCNNQKRESHGRDSDLELDSFSPPIHSDTDLSCPRLISNSERSIGSIAQSVPVDVPSPKSAKFDIFDRD SGLASKILYVEKIKVSGNSSSGSPRPKHTKVAMGILFGLCDDEKATENNHDLYGAIGYPIKVARTVIVGKKVDLVKKLLY ILTYFIRCSDVQNKDLSSLENFIDEVSLDSPLDDKSVITPIEEVANQSLEQNVMQSSNCSDKMQGSCDTLTDDYSVTGDN LRHESVISTYEGSYLIQGDSQTSGISQTNYNSQEPSNVRPNSLPLSKQDSEKCRKSIGSGTDHKDVALFCDSINSDEGYC SIVQSSNDYDKEKSQLPCRLSDSEVREDVKVVNVHHVSKAVLLKETHSMEALDTCGSPHSSPNKRTKSMLTEKLSNKSGQ ESRVPTSEIRQRFLKEGSHSIFNEYFDDESIEAKT |
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