Gene
| Gene Model ID | pfu_aug1.0_3652.1_44718 |
|---|---|
| Locus | scaffold3652.1 : 1 ... 17505 : + |
| To GenomeBrowser | scaffold3652.1:1..17505 |
| Genes list of scaffold | scaffold3652.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3652.1_44718.t1 | 2 | 1 | Oxysterol_BP | 95 | 95 | 1.6e-08 | 33.4 | 1.0 | 15000.0 | -6.2 |
| pfu_aug1.0_3652.1_44718.t1 | 2 | 2 | Oxysterol_BP | 196 | 232 | 1.6e-08 | 33.4 | 1.0e-12 | 1.6e-08 | 33.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3652.1_44718.t1 | gi|301612451|ref|XP_002935731.1| | 5.0e-15 |
Transcript
| Transcript ID | pfu_aug1.0_3652.1_44718.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3652.1_44718.t1 gagactccctcatttgaaccttatctcccgcgttcgcattcctcctgcaggggagattgacaactcctgcgtttcaatcc taatatcacctgattcctccctctttcaagttttgagcttcacatatcgtaagaaagggttaaaggaaggacagcgatgt gaagagaaaccagacaaatatcagggttacttaatgaagaggagaagatggcctatgaaggggtggcacaaggctaaaga atcagaatctcaggataagcggaaaataaaaggatttaaggcgagccggaggaaagaacggaaaagtgactcctataaca gtgatggacaggctaaagaatcagaatctcaggataaacggaaaataaaaggatttaaggcgagtcggcggaaagaacgg aaaagtgactcctataacagtgacggacagccgtctgatgaggaggacatgtctagtgagatatcagaagaaaatgaaac agattataacgctgctcagagtgtttccgaggaccagctgtcggagacatttgagacgggacgtagagacaagctgccgg taccgaagccaggtaacagtgacgtgagcctgtggaatatcctatataaaaacatcggcaaagatcttactaagatttca atgccggtcactctgaacgagcctttaggaatgttacagcatgacgtcactgactttaacatattgatgcctatggacag catcatgacatcacggtaa |
|
Protein
| Protein ID | pfu_aug1.0_3652.1_44718.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3652.1_44718.t1 RLPHLNLISRVRIPPAGEIDNSCVSILISPDSSLFQVLSFTYRKKGLKEGQRCEEKPDKYQGYLMKRRRWPMKGWHKAKE SESQDKRKIKGFKASRRKERKSDSYNSDGQAKESESQDKRKIKGFKASRRKERKSDSYNSDGQPSDEEDMSSEISEENET DYNAAQSVSEDQLSETFETGRRDKLPVPKPGNSDVSLWNILYKNIGKDLTKISMPVTLNEPLGMLQHDVTDFNILMPMDS IMTSR |
|