Gene
| Gene Model ID | pfu_aug1.0_36604.1_55580 |
|---|---|
| Locus | scaffold36604.1 : 2636 ... 6447 : + |
| To GenomeBrowser | scaffold36604.1:2636..6447 |
| Genes list of scaffold | scaffold36604.1 |
| Synonym | pfu_aug2.0_151.1_03710 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_36604.1_55580.t1 | 2 | 1 | EF-hand_8 | 13 | 40 | 4.5e-14 | 51.8 | 4.6e-06 | 0.0076 | 15.8 |
| pfu_aug1.0_36604.1_55580.t1 | 2 | 1 | EF-hand_1 | 14 | 41 | 5.9e-15 | 53.3 | 4.8e-13 | 7.8e-10 | 37.3 |
| pfu_aug1.0_36604.1_55580.t1 | 2 | 1 | EF-hand_6 | 14 | 42 | 1.6e-10 | 39.9 | 7.0e-12 | 1.2e-08 | 34.1 |
| pfu_aug1.0_36604.1_55580.t1 | 1 | 1 | EF-hand_7 | 16 | 70 | 2.9e-13 | 49.7 | 2.2e-16 | 3.6e-13 | 49.4 |
| pfu_aug1.0_36604.1_55580.t1 | 2 | 1 | EF-hand_5 | 16 | 38 | 6.5e-12 | 44.2 | 5.0e-11 | 8.2e-08 | 31.2 |
| pfu_aug1.0_36604.1_55580.t1 | 2 | 2 | EF-hand_8 | 27 | 68 | 4.5e-14 | 51.8 | 9.7e-14 | 1.6e-10 | 40.4 |
| pfu_aug1.0_36604.1_55580.t1 | 2 | 2 | EF-hand_1 | 51 | 68 | 5.9e-15 | 53.3 | 6.5e-06 | 0.011 | 15.0 |
| pfu_aug1.0_36604.1_55580.t1 | 2 | 2 | EF-hand_5 | 55 | 70 | 6.5e-12 | 44.2 | 0.0001 | 0.17 | 11.3 |
| pfu_aug1.0_36604.1_55580.t1 | 2 | 2 | EF-hand_6 | 57 | 69 | 1.6e-10 | 39.9 | 0.03 | 49.0 | 4.1 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_36604.1_55580.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_36604.1_55580.t1 atgtcgaacaattcgaaatcagaagatgagtattgtcaagaatttaaagaagcatttgcctgttttgataaagataaaag tggtacaataactaaacaagaattgaaggaggttcttacccagttgggaggaagtccactttcagatgaagaagccgatg ccatgataaaagaggctgatctgaacaacgatggcgtattaaacatggaag |
|
Protein
| Protein ID | pfu_aug1.0_36604.1_55580.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_36604.1_55580.t1 MSNNSKSEDEYCQEFKEAFACFDKDKSGTITKQELKEVLTQLGGSPLSDEEADAMIKEADLNNDGVLNME |
|