Gene
| Gene Model ID | pfu_aug1.0_3661.1_08681 |
|---|---|
| Locus | scaffold3661.1 : 7336 ... 12292 : + |
| To GenomeBrowser | scaffold3661.1:7336..12292 |
| Genes list of scaffold | scaffold3661.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3661.1_08681.t1 | 3 | 1 | Kelch_5 | 23 | 43 | 2.0e-13 | 49.9 | 1.2e-06 | 0.003 | 17.4 |
| pfu_aug1.0_3661.1_08681.t1 | 3 | 1 | Kelch_2 | 23 | 47 | 8.5e-07 | 28.5 | 3.4e-06 | 0.0084 | 15.8 |
| pfu_aug1.0_3661.1_08681.t1 | 3 | 1 | Kelch_1 | 24 | 68 | 2.5e-17 | 62.1 | 1.9e-07 | 0.00048 | 19.6 |
| pfu_aug1.0_3661.1_08681.t1 | 3 | 1 | Kelch_4 | 24 | 68 | 6.2e-13 | 48.3 | 5.4e-07 | 0.0013 | 18.4 |
| pfu_aug1.0_3661.1_08681.t1 | 3 | 1 | Kelch_6 | 25 | 68 | 1.4e-18 | 66.1 | 6.8e-09 | 1.7e-05 | 24.7 |
| pfu_aug1.0_3661.1_08681.t1 | 3 | 2 | Kelch_5 | 76 | 97 | 2.0e-13 | 49.9 | 1.7e-05 | 0.042 | 13.8 |
| pfu_aug1.0_3661.1_08681.t1 | 3 | 2 | Kelch_1 | 77 | 122 | 2.5e-17 | 62.1 | 1.3e-07 | 0.00032 | 20.1 |
| pfu_aug1.0_3661.1_08681.t1 | 3 | 2 | Kelch_6 | 80 | 124 | 1.4e-18 | 66.1 | 1.5e-08 | 3.7e-05 | 23.7 |
| pfu_aug1.0_3661.1_08681.t1 | 3 | 2 | Kelch_4 | 83 | 122 | 6.2e-13 | 48.3 | 4.7e-05 | 0.12 | 12.2 |
| pfu_aug1.0_3661.1_08681.t1 | 3 | 2 | Kelch_2 | 87 | 111 | 8.5e-07 | 28.5 | 0.0008 | 2.0 | 8.3 |
| pfu_aug1.0_3661.1_08681.t1 | 3 | 3 | Kelch_5 | 164 | 191 | 2.0e-13 | 49.9 | 7.6e-06 | 0.019 | 14.9 |
| pfu_aug1.0_3661.1_08681.t1 | 3 | 3 | Kelch_6 | 165 | 212 | 1.4e-18 | 66.1 | 1.5e-05 | 0.037 | 14.2 |
| pfu_aug1.0_3661.1_08681.t1 | 3 | 3 | Kelch_1 | 165 | 199 | 2.5e-17 | 62.1 | 5.4e-07 | 0.0013 | 18.2 |
| pfu_aug1.0_3661.1_08681.t1 | 3 | 3 | Kelch_4 | 165 | 199 | 6.2e-13 | 48.3 | 1.0e-05 | 0.025 | 14.3 |
| pfu_aug1.0_3661.1_08681.t1 | 3 | 3 | Kelch_2 | 166 | 188 | 8.5e-07 | 28.5 | 0.67 | 1700.0 | -1.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3661.1_08681.t1 | gi|292617900|ref|XP_699490.4| | PREDICTED: kelch-like protein 35 [Danio rerio] | 1.0e-11 |
Transcript
| Transcript ID | pfu_aug1.0_3661.1_08681.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3661.1_08681.t1 atgaatggaatgatgtattttgtcagcactcaaaataaatggggaatgcgcgagccaatgctattaggaagacgtcgtca tgcgatggtttctgttggtgactctttatatgtacttgggggatataatgacgaagaggatgactgtcacttcagaactc ttctaagcgtggaacagtttacgataggaagtgaaaaatgggaagacgctggctatctctctgttcctatcagatcagca tccgcggctgtagattgggacaaaatatatctcttcggtggtgtaacaagttcagattgtgacacaaaagtaattcaatg ttttgataccagacagaaaacgtgttcccgcattggtgaacttcctgtgtattgtaggctttcaaccgctttgtcttgta tgcaaaacatactgatagtctgtccgacagggtatgttctttctttttcggaaggagttataaaagattttggaaagcta cctggttttgaaagatatagctttggtgctgttatattgagtaatactattcttattttgggaggtacggattcgaatga acctgtagatgagtttatttcctttgacatggacaaaaagtccgcttctttaacgggagaatatatgccagttccaatgt ttgactttggatgtttgaagacggtcatcaacaagaaacatctaagataa |
|
Protein
| Protein ID | pfu_aug1.0_3661.1_08681.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3661.1_08681.t1 MNGMMYFVSTQNKWGMREPMLLGRRRHAMVSVGDSLYVLGGYNDEEDDCHFRTLLSVEQFTIGSEKWEDAGYLSVPIRSA SAAVDWDKIYLFGGVTSSDCDTKVIQCFDTRQKTCSRIGELPVYCRLSTALSCMQNILIVCPTGYVLSFSEGVIKDFGKL PGFERYSFGAVILSNTILILGGTDSNEPVDEFISFDMDKKSASLTGEYMPVPMFDFGCLKTVINKKHLR |
|