Gene
| Gene Model ID | pfu_aug1.0_36623.1_48243 |
|---|---|
| Locus | scaffold36623.1 : 336 ... 6446 : + |
| To GenomeBrowser | scaffold36623.1:336..6446 |
| Genes list of scaffold | scaffold36623.1 |
| Synonym | pfu_aug2.0_111.1_03635 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_36623.1_48243.t1 | 2 | 1 | adh_short_C2 | 6 | 73 | 8.4e-06 | 25.7 | 1.4e-07 | 0.0007 | 19.4 |
| pfu_aug1.0_36623.1_48243.t1 | 2 | 1 | adh_short | 8 | 70 | 5.4e-10 | 39.4 | 2.0e-05 | 0.1 | 12.5 |
| pfu_aug1.0_36623.1_48243.t1 | 2 | 2 | adh_short | 70 | 110 | 5.4e-10 | 39.4 | 8.9e-10 | 4.4e-06 | 26.7 |
| pfu_aug1.0_36623.1_48243.t1 | 2 | 2 | adh_short_C2 | 75 | 127 | 8.4e-06 | 25.7 | 0.0029 | 14.0 | 5.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_36623.1_48243.t1 | gi|260796419|ref|XP_002593202.1| | hypothetical protein BRAFLDRAFT_72720 [Branchiostoma floridae] | 6.0e-21 |
Transcript
| Transcript ID | pfu_aug1.0_36623.1_48243.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_36623.1_48243.t1 atggcatgttgcaagcaagaagggttcggatatcatcttgcaaagaatttggctttggatggatatacagtgtttgctgg ggttttgcaaatagagggacatggcgctaagcagctacgagcactaaagctgaaatctctatatgtcataaagctggatg taacatcagatgaagacgtcaaacaagcttttaaagaagtagaatcaagaaagcacggaagagtcgttaacgtgtccagt gtcttaggactgtatagtcgaccgggctggtcggtttaccatacaactaaacatgccattgagaccctaaccgatagtct tcgactggaaatggtgaaatttggagtgaaggtggccgtagtagaaccgggaacctacgacggcgcaacctcatgtagat cgcctgaaaggacgactccggcatcagagtatgtatcattgggaatttcattgccttcattttacgatgaccttataaaa aatatcagaaggatcaaaggcagatcaaacttcaaccaaaaatgtaagaaaatagtcggtcgcctgctttaccgaggata tgatcctcaagtcatcacaaaaacactgggcatggcactggaccaatctacagttttgtaccagtgtctttctcaacgtt gcacactggtcaaccgtgacgacgggactccatga |
|
Protein
| Protein ID | pfu_aug1.0_36623.1_48243.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_36623.1_48243.t1 MACCKQEGFGYHLAKNLALDGYTVFAGVLQIEGHGAKQLRALKLKSLYVIKLDVTSDEDVKQAFKEVESRKHGRVVNVSS VLGLYSRPGWSVYHTTKHAIETLTDSLRLEMVKFGVKVAVVEPGTYDGATSCRSPERTTPASEYVSLGISLPSFYDDLIK NIRRIKGRSNFNQKCKKIVGRLLYRGYDPQVITKTLGMALDQSTVLYQCLSQRCTLVNRDDGTP |
|