Gene
| Gene Model ID | pfu_aug1.0_36646.1_19599 |
|---|---|
| Locus | scaffold36646.1 : 1 ... 6442 : + |
| To GenomeBrowser | scaffold36646.1:1..6442 |
| Genes list of scaffold | scaffold36646.1 |
| Synonym | pfu_aug2.0_2490.1_02150 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_36646.1_19599.t1 | 1 | 1 | SBP_bac_3 | 55 | 156 | 3.5e-15 | 55.8 | 1.7e-18 | 6.4e-15 | 55.0 |
| pfu_aug1.0_36646.1_19599.t1 | 1 | 1 | Lig_chan-Glu_bd | 56 | 116 | 5.7e-13 | 48.6 | 2.7e-16 | 1.0e-12 | 47.8 |
| pfu_aug1.0_36646.1_19599.t1 | 1 | 1 | Lig_chan | 172 | 231 | 2.6e-12 | 46.6 | 1.0e-15 | 3.8e-12 | 46.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_36646.1_19599.t1 | gi|297678774|ref|XP_002817237.1| | 7.9874e-44 |
Transcript
| Transcript ID | pfu_aug1.0_36646.1_19599.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_36646.1_19599.t1 accgaggttgctttgatgtatgatgcagtgcaggtttttgatagagcattaggaaatttacgaaaagccattaacgtgga ctttgaccggaagttacattgtaacagaacggataccacgtgggacgatggcaccagtctattaaattatatgaaaacag atgatccgtacgtgtttgccagaaacaagaacccggatggaagtatcaaatacactggattcgtcattgacattttggat atgatcagcgagcgactaaacttcacctacgatatagtgaaaaatgctgatgattatggaagctgtacgggtaaaaagtc atgtactgggatgatgaaggaactggttacacataaagcagaccttgctgcggcgggtatgacaataacggcagagagag acgaatatgtggatttcactaagccattcaagaacttgggaattaccatactcatcaagaaaccgaaagtaaaagctcca aatctcttcagcttcctggatccatttcatccaaacgtttggatgttcatggtggctggctttatctgcgtcactataat gcttttcatttctgccagattttctccgtatgaatggaatccggaggagggcagtgaggaatcggacatcgtcgtcaatc agttctccatctctaacagcgtgtggtttaccattggatgtattttacaacaag |
|
Protein
| Protein ID | pfu_aug1.0_36646.1_19599.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_36646.1_19599.t1 TEVALMYDAVQVFDRALGNLRKAINVDFDRKLHCNRTDTTWDDGTSLLNYMKTDDPYVFARNKNPDGSIKYTGFVIDILD MISERLNFTYDIVKNADDYGSCTGKKSCTGMMKELVTHKADLAAAGMTITAERDEYVDFTKPFKNLGITILIKKPKVKAP NLFSFLDPFHPNVWMFMVAGFICVTIMLFISARFSPYEWNPEEGSEESDIVVNQFSISNSVWFTIGCILQQ |
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