Gene
Gene Model ID | pfu_aug1.0_3667.1_16148 |
---|---|
Locus | scaffold3667.1 : 32396 ... 47388 : + |
To GenomeBrowser | scaffold3667.1:32396..47388 |
Genes list of scaffold | scaffold3667.1 |
Synonym | pfu_aug2.0_795.1_17833 |
Manual annotation
Study field | Biomineralization |
---|---|
Gene name | Activin receptor type2 like |
Description | NCBI blastp hit to emb|CAR92545.1| activin type II receptor precursor [Crassostrea gigas]. |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_3667.1_16148.t1 | 1 | 1 | Pkinase | 77 | 357 | 0.0 | 188.7 | 0.0 | 0.0 | 188.3 |
pfu_aug1.0_3667.1_16148.t1 | 1 | 1 | Pkinase_Tyr | 83 | 353 | 3.8e-32 | 111.3 | 1.7e-35 | 6.3e-32 | 110.6 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_3667.1_16148.t1 | gi|210078005|emb|CAR92545.1| | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_3667.1_16148.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3667.1_16148.t1 atgtaccgtgtaggaaaccctatacaggccctaccttcagaggaccctgtagcaaagaccttgatggtaacactggtgcc catttctgctgtggtcatttttattgtcgtaggatttttcttgttcagatatctacggaaggaagggaggtatatggccc accaacagttacctatactggatccagagttatctatgccggagtcactccttccccataaaccaatacagttacttgaa atcagagctcatggcaggtttggagaagtatggaaggcaaagatggaggaacatgatgttgccgttaagataatgccgtt caaagagaaagcgtcatggctggctgaacaggagatttacaacctgccgcatatggcccatgacaacattctgttattcg ttggagcggagaaacatgaggagaacctatggttgatcacccagttccacgagaaagggtctttgtgtgaatatttgaaa gggaataccataacatggagccagctatgtaaaatggctgaaacaatgtccaggggtttggcttacttacacgatgaaat tcctgggggcaggggtaccgaggctaagccagctatagcccatcgagactttaagagtaagaacgttttattgaaggatg acctcagtgcatgtatagccgactttggactcgctctgaagtttgaaccgggtaaaagtccaggagagactcatgggctg gttggaacaaggagatacatggccccggaaatcctagagggcgctatcagttttaagcgtgatgcttttctgcgtattga catgtacgcttgcagcttggtattgtgggagttggtgacacgatgttcgtgcgttgacggtccgattgacgagtatcagc tgccatttgaggaggaagttggctctcaccctacactggaggatttacaagacttagtcgtgatgaagaaagtacgaccc tccataaaggaacactggcagagacatgctggtttggatgcactgatatctactatagaagaatgctgggatcaagatgc ggaggctcgtgtatctgccgtgtgtgtgaacgaacgaatgaaccaattaacgctataccagatgtttatatcgtatacca agtgtgcaagataa |
Protein
Protein ID | pfu_aug1.0_3667.1_16148.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3667.1_16148.t1 MYRVGNPIQALPSEDPVAKTLMVTLVPISAVVIFIVVGFFLFRYLRKEGRYMAHQQLPILDPELSMPESLLPHKPIQLLE IRAHGRFGEVWKAKMEEHDVAVKIMPFKEKASWLAEQEIYNLPHMAHDNILLFVGAEKHEENLWLITQFHEKGSLCEYLK GNTITWSQLCKMAETMSRGLAYLHDEIPGGRGTEAKPAIAHRDFKSKNVLLKDDLSACIADFGLALKFEPGKSPGETHGL VGTRRYMAPEILEGAISFKRDAFLRIDMYACSLVLWELVTRCSCVDGPIDEYQLPFEEEVGSHPTLEDLQDLVVMKKVRP SIKEHWQRHAGLDALISTIEECWDQDAEARVSAVCVNERMNQLTLYQMFISYTKCAR |