Gene
| Gene Model ID | pfu_aug1.0_36788.1_12262 |
|---|---|
| Locus | scaffold36788.1 : 2536 ... 6305 : + |
| To GenomeBrowser | scaffold36788.1:2536..6305 |
| Genes list of scaffold | scaffold36788.1 |
| Synonym | pfu_aug2.0_432.1_07511 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_36788.1_12262.t1 | 1 | 1 | rve | 13 | 73 | 4.7e-16 | 58.9 | 9.2e-20 | 6.8e-16 | 58.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_36788.1_12262.t1 | gi|115727795|ref|XP_782581.2| | 8.0e-36 |
Transcript
| Transcript ID | pfu_aug1.0_36788.1_12262.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_36788.1_12262.t1 atgcaatctacaccagcttcaaagactatcgagaaacttcacatacgttttgcacaatatggattgccgaagcagattgt atcggataatggaccacaatttttggctgatgaatttcgtacctttctatcgcaatatggaattcaacatataaactcag ctccttacaatccgcgaacgaatggtcaagctgaacgcctagttcaagtttttaagaatgcgatgaaaagtgcaaaggga gatgaccgtacttggaatcacaagcttagcatatttctgttcaagtaccgaacaactccgcattccgttactaacgaaac accggaaaagttgttattaggtcgagatctcagaaccagattagatcttcttaaaccagatttagaagctaaagtcactt caagtcaagaaaggatgaaactttctaagcattgtggaaagaaagttcgtgaatcatcagtaacaatcaaaatgttatgg ttcgtgattaccgctcacatggagaaaaatggattccagctactatcaattcgcgttctggaccattttcttacagtgtc gatactggatatggtacttcatggcgtcgacatgcagatcaaattcgttttggaacatgcgaacgtgaagatccgcaaat attga |
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Protein
| Protein ID | pfu_aug1.0_36788.1_12262.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_36788.1_12262.t1 MQSTPASKTIEKLHIRFAQYGLPKQIVSDNGPQFLADEFRTFLSQYGIQHINSAPYNPRTNGQAERLVQVFKNAMKSAKG DDRTWNHKLSIFLFKYRTTPHSVTNETPEKLLLGRDLRTRLDLLKPDLEAKVTSSQERMKLSKHCGKKVRESSVTIKMLW FVITAHMEKNGFQLLSIRVLDHFLTVSILDMVLHGVDMQIKFVLEHANVKIRKY |
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