Gene
| Gene Model ID | pfu_aug1.0_37.1_36248 |
|---|---|
| Locus | scaffold37.1 : 112061 ... 142825 : - |
| To GenomeBrowser | scaffold37.1:112061..142825 |
| Genes list of scaffold | scaffold37.1 |
| Synonym | pfu_aug2.0_1033.1_11388 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_37.1_36248.t1 | 2 | 1 | MYCBPAP | 151 | 537 | 0.0 | 315.5 | 0.0 | 0.0 | 312.8 |
| pfu_aug1.0_37.1_36248.t1 | 2 | 2 | MYCBPAP | 621 | 666 | 0.0 | 315.5 | 0.042 | 620.0 | -1.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_37.1_36248.t1 | gi|115662434|ref|XP_001203590.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_37.1_36248.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_37.1_36248.t1 acatttttataaagcttttgttttttgtgtaattatggggaaggaagaccatacaaaggaatctcgtcgactgagcaaag atcatagtcatagaagagaccggcggtattctgtactcaacagagacggacataagcttaagggtaagaagaatgccccc gggacacctgacaagtctggcacaccctcacaggacgctggagacgacaaccaatcaccgaccagaaacgtcatctggaa tgaggagatagaaaaactacagatcaaagaggatgacctgaaaaatctaagggaggtctctccaccaggacctcacaaat cacctaagacagacaaggtgatcgtgaagaagatgaaacctctctctgaaatcaacaaaccaaaaccaaagattgtgaca gtggccaagccagcccctcctgatgctccagtaaaggtccctgattactcagaattactgcagaagaatcccgaagatct ggccatgaatgcggcagataactacaggaagattcaggaggagaggtacatcatagatagaaccataccggcgatggatt acggcaaaggatctcacctcgacgaagttgatatgaccttgacccagacagagcgaggttacccacgacctgtagaacat gttggtttgtctaagtcagtaagacaggagaagggatggcactggccaccttaccataccacacccgtacactatccctg gcataaaaacccttaccttgaggagaggaagaaacagttacagcctgtcatagatgaactggatcctcataaacctgact ttgatggtctggagattatagggacagctaatcctgtggagagacagagggtagaatctaacataggatttatagaggaa atgagagaggaggatgaaaaacttacaatagatgacgacgagctggatatagacccagtgaaggatggtgaggagcctca gcctgagaccatctttggaccatccattacatttgctggtcagccagccagatggacaggggacagctcatcgtttgctg accaggttggaatagaggccagagtaacatttgaatcttactcaagtgacagggttacatcatatctatatatagtcaat gatggtaccacagcagtttactatgactggaagaaattaccgaaagacaatccatttgacctagttcatgcccatgtaca gagattttactttaacaatagttcaggtgtgatactgcctggagagacgatgaaattcccgtttgtctttaagtcgccca atgcgggtgtcttcacagaacaatggaagtttgagacccgcccacggctctgtgggggtgcctcccttattgtgaccctc aggggaatagccctacaagaggacaaattcaaagtagaaagagaggaattggagagagatttacaacagaagcaagccga tcaagttgtacgacaaattatgtacgacattattagcggtattaaaactcctgatcgaccctcatcaccagttgatgcgt acattacagacgaggaaatattctctcgcaataatcctaagttacattataaccatgaatcagtgcaggagcttaagcag ctctacttagagatagctccagaggaggagagagctggaaggatctgggatctctctatacaagatctcaaagatgaaat attatgtatggatgaagaagatgaaagaaaagagaatttccttcaccagctcaatactacagtatccaagatgtcatact gccaaaatcaacctacaaagaaaaatttatataaagttgggtacgagttactggtagagatggtagacggtgtagtgagg gagtcagccatgctcagaaaatccataggattgccggaaaaagatcctgaggaatttgctgaggatcaaacaaggaagac aaggtttaaaaaaacatggagacgcgcctcagtaatggttggacagaatcctagtttaatgccccaaattaagggcttgg atcctagtgacgctaggagtaaaaaggcagaaaagactgcaaaacctgtccctgacaagaaagcgccacctccgaaggac cctaaagcagccaaaggagggaaagagactgctaaagcagaaccgaaaggtaaaactccagtcccagccaagaagccggc cagtagtcgtggtccatcagctacccccgggccggggagtatgttaccccctgacagggagaggacacacacacctacca gtggtacacatagtcccatgcctgcagacgtagatcccgtgttgttcagaaaatataaacagaaactcttagctcagacg tatctgatggtaggggataccatggaccagatggagcgggtttttgaggaggttctacagtcagaagaaagacctcccct gtcactgtga |
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Protein
| Protein ID | pfu_aug1.0_37.1_36248.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_37.1_36248.t1 HFYKAFVFCVIMGKEDHTKESRRLSKDHSHRRDRRYSVLNRDGHKLKGKKNAPGTPDKSGTPSQDAGDDNQSPTRNVIWN EEIEKLQIKEDDLKNLREVSPPGPHKSPKTDKVIVKKMKPLSEINKPKPKIVTVAKPAPPDAPVKVPDYSELLQKNPEDL AMNAADNYRKIQEERYIIDRTIPAMDYGKGSHLDEVDMTLTQTERGYPRPVEHVGLSKSVRQEKGWHWPPYHTTPVHYPW HKNPYLEERKKQLQPVIDELDPHKPDFDGLEIIGTANPVERQRVESNIGFIEEMREEDEKLTIDDDELDIDPVKDGEEPQ PETIFGPSITFAGQPARWTGDSSSFADQVGIEARVTFESYSSDRVTSYLYIVNDGTTAVYYDWKKLPKDNPFDLVHAHVQ RFYFNNSSGVILPGETMKFPFVFKSPNAGVFTEQWKFETRPRLCGGASLIVTLRGIALQEDKFKVEREELERDLQQKQAD QVVRQIMYDIISGIKTPDRPSSPVDAYITDEEIFSRNNPKLHYNHESVQELKQLYLEIAPEEERAGRIWDLSIQDLKDEI LCMDEEDERKENFLHQLNTTVSKMSYCQNQPTKKNLYKVGYELLVEMVDGVVRESAMLRKSIGLPEKDPEEFAEDQTRKT RFKKTWRRASVMVGQNPSLMPQIKGLDPSDARSKKAEKTAKPVPDKKAPPPKDPKAAKGGKETAKAEPKGKTPVPAKKPA SSRGPSATPGPGSMLPPDRERTHTPTSGTHSPMPADVDPVLFRKYKQKLLAQTYLMVGDTMDQMERVFEEVLQSEERPPL SL |
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