Gene
| Gene Model ID | pfu_aug1.0_37013.1_41024 |
|---|---|
| Locus | scaffold37013.1 : 1432 ... 16765 : - |
| To GenomeBrowser | scaffold37013.1:1432..16765 |
| Genes list of scaffold | scaffold37013.1 |
| Synonym | pfu_aug2.0_175.1_17063 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_37013.1_41024.t1 | 1 | 1 | Arf | 1 | 114 | 2.10195e-44 | 150.8 | 0.0 | 3.64338e-44 | 150.0 |
| pfu_aug1.0_37013.1_41024.t1 | 1 | 1 | G-alpha | 4 | 80 | 2.1e-06 | 26.6 | 8.6e-10 | 2.1e-06 | 26.6 |
| pfu_aug1.0_37013.1_41024.t1 | 1 | 1 | Ras | 6 | 92 | 1.1e-07 | 31.4 | 8.1e-11 | 2.0e-07 | 30.5 |
| pfu_aug1.0_37013.1_41024.t1 | 1 | 1 | Gtr1_RagA | 8 | 100 | 7.8e-08 | 31.7 | 5.6e-11 | 1.4e-07 | 30.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_37013.1_41024.t1 | gi|57525748|ref|NP_001003590.1| | uncharacterized protein LOC445196 [Danio rerio] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_37013.1_41024.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_37013.1_41024.t1 gtttcaatgtagaaactgtagaatacaagaatattagcttcacagtatgggatgtaggtggtcaggataaaatccgtccc ttatggagacattacttccagaacacacaggggctgatatttgtgattgacagcaatgacagagaaagagcagaagaagc taaggatgaactaagtaaaatgctccaggaggacgagttgagagatgcaaaattattagtgtttgccaataaacaggatc tgcctaatgccatgccagcagctgaaattacagaaaaattgggacttcaatgcctaagaaacagaacagatttaagatca tgtaaaaatagtggtctgtcaggaagagaaccagatggcactaaaggggtacaacttacaccaaaggaagatgaacctca agtacatgcagatagtgggaagaaagagagaagagggtctagatctggcaaaaggaaatcctgtttggaagtaagaaagg gaaagatttctaagattagtacatgcgacactctgaaggcagaggaaaatgtagcagaaaatgatggtgacaatggtagt aagactgagaaactgaaggacaagactaattattcaaacatcagtgactttgcaacgtgttatgattcaaggtcggatag agatacccctgaattgctggaagacgcctcattacgttcaagtcaaactcagcctcagctagaatataaagtgatgtctg atgaagaacaatacaaacaacattgtaagaagtatctaggaggtgaaatctcaacaaacattgtcacattcaagcaaact tctgagatgttaacgagggaaaatctgatatgtcccactcttcctccttctcacaatgaccttgaacagactgatctagt atactctctggaaactaacacagacacctgtcaggagatgtctgacagaatacctcgaactccagtctctgagagaaata actgtaataattatacatcaggcccgcatgttgatctcaggaattttgattccccctcaccgatagttagagtagataaa tacctggagagagtaggtgtcagctcctcaggaaatgctactccaacaaggaacggcaattactccttcccgttagtgag tcagtcctcgccatttaccttcgtccaccaggcaggaagtataggattggatggtgaacctacagaaacgggagacagtg atacagaggacgtattgacggaaataaacaagtctataggtgaggcctaa |
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Protein
| Protein ID | pfu_aug1.0_37013.1_41024.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_37013.1_41024.t1 FNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVIDSNDRERAEEAKDELSKMLQEDELRDAKLLVFANKQDL PNAMPAAEITEKLGLQCLRNRTDLRSCKNSGLSGREPDGTKGVQLTPKEDEPQVHADSGKKERRGSRSGKRKSCLEVRKG KISKISTCDTLKAEENVAENDGDNGSKTEKLKDKTNYSNISDFATCYDSRSDRDTPELLEDASLRSSQTQPQLEYKVMSD EEQYKQHCKKYLGGEISTNIVTFKQTSEMLTRENLICPTLPPSHNDLEQTDLVYSLETNTDTCQEMSDRIPRTPVSERNN CNNYTSGPHVDLRNFDSPSPIVRVDKYLERVGVSSSGNATPTRNGNYSFPLVSQSSPFTFVHQAGSIGLDGEPTETGDSD TEDVLTEINKSIGEA |
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