Gene
| Gene Model ID | pfu_aug1.0_3705.1_08693 |
|---|---|
| Locus | scaffold3705.1 : 1 ... 4575 : - |
| To GenomeBrowser | scaffold3705.1:1..4575 |
| Genes list of scaffold | scaffold3705.1 |
| Synonym | pfu_aug2.0_1689.1_31845 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3705.1_08693.t1 | 2 | 1 | BTB | 50 | 156 | 2.8e-27 | 94.9 | 1.5e-29 | 2.3e-26 | 91.9 |
| pfu_aug1.0_3705.1_08693.t1 | 2 | 2 | BTB | 160 | 187 | 2.8e-27 | 94.9 | 0.13 | 190.0 | 2.0 |
| pfu_aug1.0_3705.1_08693.t1 | 1 | 1 | BACK | 162 | 263 | 2.7e-24 | 84.9 | 4.2e-27 | 6.2e-24 | 83.7 |
| pfu_aug1.0_3705.1_08693.t1 | 5 | 1 | Kelch_1 | 336 | 386 | 0.0 | 159.1 | 1.0e-11 | 1.5e-08 | 34.0 |
| pfu_aug1.0_3705.1_08693.t1 | 5 | 1 | Kelch_2 | 337 | 382 | 4.4e-14 | 51.5 | 0.091 | 130.0 | 2.5 |
| pfu_aug1.0_3705.1_08693.t1 | 5 | 1 | Kelch_6 | 338 | 389 | 6.0e-32 | 108.4 | 3.1e-09 | 4.6e-06 | 26.5 |
| pfu_aug1.0_3705.1_08693.t1 | 5 | 1 | Kelch_4 | 341 | 375 | 3.5e-20 | 71.4 | 0.15 | 220.0 | 1.7 |
| pfu_aug1.0_3705.1_08693.t1 | 4 | 1 | Kelch_3 | 346 | 390 | 2.7e-12 | 46.4 | 0.001 | 1.5 | 9.0 |
| pfu_aug1.0_3705.1_08693.t1 | 5 | 2 | Kelch_1 | 388 | 431 | 0.0 | 159.1 | 2.0e-11 | 3.0e-08 | 33.0 |
| pfu_aug1.0_3705.1_08693.t1 | 5 | 2 | Kelch_6 | 388 | 431 | 6.0e-32 | 108.4 | 1.3e-06 | 0.0019 | 18.2 |
| pfu_aug1.0_3705.1_08693.t1 | 5 | 2 | Kelch_4 | 388 | 427 | 3.5e-20 | 71.4 | 7.9e-07 | 0.0012 | 18.5 |
| pfu_aug1.0_3705.1_08693.t1 | 4 | 1 | Kelch_5 | 388 | 412 | 6.7e-08 | 32.3 | 0.028 | 42.0 | 4.2 |
| pfu_aug1.0_3705.1_08693.t1 | 5 | 2 | Kelch_2 | 395 | 431 | 4.4e-14 | 51.5 | 0.33 | 490.0 | 0.7 |
| pfu_aug1.0_3705.1_08693.t1 | 4 | 2 | Kelch_5 | 437 | 455 | 6.7e-08 | 32.3 | 0.0095 | 14.0 | 5.7 |
| pfu_aug1.0_3705.1_08693.t1 | 5 | 3 | Kelch_1 | 439 | 479 | 0.0 | 159.1 | 7.3e-08 | 0.00011 | 21.6 |
| pfu_aug1.0_3705.1_08693.t1 | 5 | 3 | Kelch_4 | 439 | 474 | 3.5e-20 | 71.4 | 0.0036 | 5.3 | 6.8 |
| pfu_aug1.0_3705.1_08693.t1 | 5 | 3 | Kelch_2 | 439 | 479 | 4.4e-14 | 51.5 | 0.00044 | 0.65 | 9.8 |
| pfu_aug1.0_3705.1_08693.t1 | 5 | 3 | Kelch_6 | 446 | 480 | 6.0e-32 | 108.4 | 2.0e-06 | 0.0029 | 17.6 |
| pfu_aug1.0_3705.1_08693.t1 | 4 | 2 | Kelch_3 | 447 | 488 | 2.7e-12 | 46.4 | 0.00073 | 1.1 | 9.5 |
| pfu_aug1.0_3705.1_08693.t1 | 5 | 4 | Kelch_1 | 483 | 530 | 0.0 | 159.1 | 2.3e-12 | 3.5e-09 | 36.0 |
| pfu_aug1.0_3705.1_08693.t1 | 5 | 4 | Kelch_6 | 483 | 528 | 6.0e-32 | 108.4 | 4.0e-08 | 6.0e-05 | 23.0 |
| pfu_aug1.0_3705.1_08693.t1 | 5 | 4 | Kelch_4 | 483 | 530 | 3.5e-20 | 71.4 | 5.6e-08 | 8.3e-05 | 22.2 |
| pfu_aug1.0_3705.1_08693.t1 | 5 | 4 | Kelch_2 | 483 | 510 | 4.4e-14 | 51.5 | 1.7e-06 | 0.0025 | 17.5 |
| pfu_aug1.0_3705.1_08693.t1 | 4 | 3 | Kelch_5 | 488 | 500 | 6.7e-08 | 32.3 | 0.055 | 81.0 | 3.3 |
| pfu_aug1.0_3705.1_08693.t1 | 4 | 3 | Kelch_3 | 492 | 530 | 2.7e-12 | 46.4 | 0.0014 | 2.0 | 8.6 |
| pfu_aug1.0_3705.1_08693.t1 | 4 | 4 | Kelch_5 | 537 | 570 | 6.7e-08 | 32.3 | 5.7e-05 | 0.084 | 12.8 |
| pfu_aug1.0_3705.1_08693.t1 | 5 | 5 | Kelch_1 | 538 | 573 | 0.0 | 159.1 | 2.3e-10 | 3.4e-07 | 29.6 |
| pfu_aug1.0_3705.1_08693.t1 | 5 | 5 | Kelch_4 | 538 | 573 | 3.5e-20 | 71.4 | 1.3e-05 | 0.019 | 14.7 |
| pfu_aug1.0_3705.1_08693.t1 | 5 | 5 | Kelch_6 | 539 | 573 | 6.0e-32 | 108.4 | 1.3e-06 | 0.002 | 18.2 |
| pfu_aug1.0_3705.1_08693.t1 | 5 | 5 | Kelch_2 | 540 | 572 | 4.4e-14 | 51.5 | 5.5e-06 | 0.0082 | 15.8 |
| pfu_aug1.0_3705.1_08693.t1 | 4 | 4 | Kelch_3 | 545 | 575 | 2.7e-12 | 46.4 | 0.00011 | 0.16 | 12.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3705.1_08693.t1 | gi|109123970|ref|XP_001114706.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_3705.1_08693.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3705.1_08693.t1 atgcctttatctccaaggaaacagcaaagaaatgggtcatctgatcctccacctgaaggtcaggtcgttgaccttgacct cacgagtgatggcatcatggagatgtttctgaaagctgatagtcatcaggacaaattattaaaaagtctcaacagcctgc gtgcagatgaatcttcttgtgattttcgtttagtcgctgatgatgtcacttttccggtacacaaggtggtcttgatagca tgtagtgactatttccatgccatgatgaaaagtagcatgcgggagagcagggaaaacattgtggatttgaaaggtgtcac ggcaaatggactaaaaataatcgttgattttatttacacaggtgctatgttgttaaatctccagaacgttgaggacgtcc ttgcggcagcatctcatctccaggttcatgaagctatagagctctgtagcaagtacctgcaggcctccatatgtgtcaga aactgtgtagacatccttaacattgctgagctctactctttgtcgtccttgagaaaatcggcaaaatcattcattctccg acattttgaagatttaactggttttgaccagtatcctctattaaacgagtctcagatggcagagtttctgagtgacaacg gattgcgtgtcatgtcagagttcacacttttcaatcttgtgttaaaatggatacagcattcccctgtggagagggagcag tacgtgacagacctgatgagaaacataagacttccgctactgtccggagaggagctggtggaaaaagtgagtcgtgttcc gataatgcgacggaatgcagaatgttgcgatttgctaacagaagctaaggattatcatattgttgtaagcaagcaacctc tgctacaaagcaacagaacacaggttaggtcaaccaatcagtgtatagttatttgccacgctcaaactcttgaaaactac tcactgaccacaaaacgacgagggtttttaaaagagaacactgtagcactatacaatccatcagtagcagtggtggataa tttcctatatacatgtggtggcaagtatgagggtggtggaacgacagacatagcaatggccaggtgcttccgctacgatc cacgatttgacagatggtttgagctggcacctatgaacgaaccaaggaaagattttgttttggtggccatagaaaagaaa ctttacgctatcgcaggacaggatgaaaacaaggtcatgcacaccatagagtgctatgacattgtacgcaatgaatggga aatgaaatgtccgctaactcggcatgtttttagacatgcgggtacggtatgcatgggaaaaatctacatttccggaggtc agatattttcaggcacgtggagaaagctgttttgctactcgcctacaacagactcttgggtagaaaaggcccccatgctt cgcaatcggcaagatcacattatgacagaagtcggagggaagttgtatgttatagggggccataatgacatagatccctt atttatattccctgtccctctcaaagaagtggaaaagtactgcccagaaactaaccaatggacaatctgtaaggcggagc tttctataattggcgctggcgcatgtgttttggacaataccatatacatcgtaggtggaatggagaggcacaattcctta accaacaaaatccacaaatacgatccacagaaagatgaagtacagatagaggacctgtataacatccgtattaatggatg tgcttgtgcactactcactttgccatattatgcttaa |
|
Protein
| Protein ID | pfu_aug1.0_3705.1_08693.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3705.1_08693.t1 MPLSPRKQQRNGSSDPPPEGQVVDLDLTSDGIMEMFLKADSHQDKLLKSLNSLRADESSCDFRLVADDVTFPVHKVVLIA CSDYFHAMMKSSMRESRENIVDLKGVTANGLKIIVDFIYTGAMLLNLQNVEDVLAAASHLQVHEAIELCSKYLQASICVR NCVDILNIAELYSLSSLRKSAKSFILRHFEDLTGFDQYPLLNESQMAEFLSDNGLRVMSEFTLFNLVLKWIQHSPVEREQ YVTDLMRNIRLPLLSGEELVEKVSRVPIMRRNAECCDLLTEAKDYHIVVSKQPLLQSNRTQVRSTNQCIVICHAQTLENY SLTTKRRGFLKENTVALYNPSVAVVDNFLYTCGGKYEGGGTTDIAMARCFRYDPRFDRWFELAPMNEPRKDFVLVAIEKK LYAIAGQDENKVMHTIECYDIVRNEWEMKCPLTRHVFRHAGTVCMGKIYISGGQIFSGTWRKLFCYSPTTDSWVEKAPML RNRQDHIMTEVGGKLYVIGGHNDIDPLFIFPVPLKEVEKYCPETNQWTICKAELSIIGAGACVLDNTIYIVGGMERHNSL TNKIHKYDPQKDEVQIEDLYNIRINGCACALLTLPYYA |
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