Gene
| Gene Model ID | pfu_aug1.0_3705.1_08694 |
|---|---|
| Locus | scaffold3705.1 : 6806 ... 18743 : + |
| To GenomeBrowser | scaffold3705.1:6806..18743 |
| Genes list of scaffold | scaffold3705.1 |
| Synonym | pfu_aug2.0_1689.1_31844 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3705.1_08694.t1 | 3 | 1 | C2 | 17 | 71 | 1.9e-10 | 40.4 | 5.5e-09 | 8.2e-05 | 22.3 |
| pfu_aug1.0_3705.1_08694.t1 | 3 | 2 | C2 | 103 | 116 | 1.9e-10 | 40.4 | 0.00036 | 5.4 | 6.9 |
| pfu_aug1.0_3705.1_08694.t1 | 3 | 3 | C2 | 128 | 148 | 1.9e-10 | 40.4 | 3.6e-05 | 0.54 | 10.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3705.1_08694.t1 | gi|317419727|emb|CBN81763.1| | Copine-3 [Dicentrarchus labrax] | 1.0e-37 |
Transcript
| Transcript ID | pfu_aug1.0_3705.1_08694.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3705.1_08694.t1 atggactattccgtcttttcgattttacagtcctatgttcgatttgtgcagattggacgtacagagaacatacagaactg tcatgaccctaagtttgccaaatgttttactgtggattattactttgaggaggtacagcgtgtgaaagtggagatatacg acattgataatgctacacccaaactgacggatgatgacttcctaggaatggtggaatgtaacttaggggagatagtgtcc aggaatccatttacttcaccgttaaagaagaaaaatgggaaagattacgggatgtctgccattacagacttttttgggaa atctgatccttatgtagaaattcaaaggcatcttcccgacggggcctggcaagttgttcatcggacagagtttgtagttt atgactgggatagtgatgggtcacatgaccttataggagactttgagacgaccatcaacaagctgtgttcacaagaacag aacagccgaatgaaggatttgtga |
|
Protein
| Protein ID | pfu_aug1.0_3705.1_08694.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3705.1_08694.t1 MDYSVFSILQSYVRFVQIGRTENIQNCHDPKFAKCFTVDYYFEEVQRVKVEIYDIDNATPKLTDDDFLGMVECNLGEIVS RNPFTSPLKKKNGKDYGMSAITDFFGKSDPYVEIQRHLPDGAWQVVHRTEFVVYDWDSDGSHDLIGDFETTINKLCSQEQ NSRMKDL |
|