Gene
| Gene Model ID | pfu_aug1.0_3705.1_08696 |
|---|---|
| Locus | scaffold3705.1 : 43553 ... 59001 : - |
| To GenomeBrowser | scaffold3705.1:43553..59001 |
| Genes list of scaffold | scaffold3705.1 |
| Synonym | pfu_aug2.0_540.1_00856 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3705.1_08696.t1 | 1 | 1 | AIG1 | 44 | 247 | 0.0 | 173.6 | 0.0 | 0.0 | 173.6 |
| pfu_aug1.0_3705.1_08696.t1 | 1 | 1 | MMR_HSR1 | 44 | 149 | 3.4e-07 | 30.2 | 3.2e-10 | 4.7e-07 | 29.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3705.1_08696.t1 | gi|221220730|gb|ACM09026.1| | GTPase IMAP family member 7 [Salmo salar] | 2.0e-32 |
Transcript
| Transcript ID | pfu_aug1.0_3705.1_08696.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3705.1_08696.t1 ggtctcagtcaagcagtggtcagtatgagggatcagatttcataacagacgataatgatgtatttgatgcacctgacaat ggctgttctgcacaatttgctgaaagcgcaggtgctgacatatcagacgtccgcattttactgattggaaaaacagggac gggtaagagctcaactggaaacatgattctgggaaaaaaagtttttaaaagtggagtaagtttatcatctgttacctcta aatgtgactgtgcgtcgaccatacatacatacgacaaccaaaaatttaatgtaacaatagttgacactcccggacctttt gactctgaaggcaaatgtgaaaacatgaacgatattttcgttgaagctgtcggcctctcgtcgccagggtttcatgttat cataatggtattgaaaaatgacagatttacaaagcaggacgaagaaactctcgatttctacatagatttcttcggagaaa acctctttagacatttaataatagctttcacacatcgtgatgtaatagaggcatcaatgactttcgatgaatttctgaat acactgaaacacgagaaatttagcgaaattacatcacactgtcaaaacagagtcctatgctttaacaacgtggatagttc gagagatcaacttgaccaacttttctgtcatgtgcagaatattttggaaatgaacaatggcaattgctttactgatcgcc tttacaaatccgttgagggaatcatacaagatatgaggaaaagcttgagaaaatcaaagaggataaagaaggcagctgat gtagtgaatgatcttaaacagaaataccccgatgaaacgctgaaacaaatcgagaaaagaatatctgagggacagaaagt caaaaagatcgataaaatgttctcatcctcttctgcaaaacttatcaacgaagcactgcagtttgttgaaaaagaagttg aaaaggaaatcaaagcagaaataattcagcatagaggcatgtggcagagaataaaagaaacaatctctaatgttttatca aggaagagatctaatacaaaagtgacaccagaggcttga |
|
Protein
| Protein ID | pfu_aug1.0_3705.1_08696.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3705.1_08696.t1 SQSSSGQYEGSDFITDDNDVFDAPDNGCSAQFAESAGADISDVRILLIGKTGTGKSSTGNMILGKKVFKSGVSLSSVTSK CDCASTIHTYDNQKFNVTIVDTPGPFDSEGKCENMNDIFVEAVGLSSPGFHVIIMVLKNDRFTKQDEETLDFYIDFFGEN LFRHLIIAFTHRDVIEASMTFDEFLNTLKHEKFSEITSHCQNRVLCFNNVDSSRDQLDQLFCHVQNILEMNNGNCFTDRL YKSVEGIIQDMRKSLRKSKRIKKAADVVNDLKQKYPDETLKQIEKRISEGQKVKKIDKMFSSSSAKLINEALQFVEKEVE KEIKAEIIQHRGMWQRIKETISNVLSRKRSNTKVTPEA |
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