Gene
| Gene Model ID | pfu_aug1.0_3709.1_44738 |
|---|---|
| Locus | scaffold3709.1 : 1 ... 29925 : - |
| To GenomeBrowser | scaffold3709.1:1..29925 |
| Genes list of scaffold | scaffold3709.1 |
| Synonym | pfu_aug2.0_210.1_00436 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3709.1_44738.t1 | 1 | 1 | DUF3497 | 89 | 275 | 4.1e-07 | 29.5 | 1.7e-10 | 1.3e-06 | 27.9 |
| pfu_aug1.0_3709.1_44738.t1 | 2 | 1 | GEMIN8 | 180 | 200 | 7.1e-22 | 78.4 | 0.48 | 3600.0 | -2.3 |
| pfu_aug1.0_3709.1_44738.t1 | 2 | 2 | GEMIN8 | 817 | 977 | 7.1e-22 | 78.4 | 9.5e-26 | 7.1e-22 | 78.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| >Adult tissues | |
| adductorMuscle | 2 |
| maleGonad | 2 |
Transcript
| Transcript ID | pfu_aug1.0_3709.1_44738.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3709.1_44738.t1 atgttcaatttggcgtctattttaagaaatcgaaaaaggattgtttttgatatccatttacttagtactcgtctatttgt tactttactgtttgacagtgttgtcaccagacgatgtgtactggttgatggtataccggagtgggaaagacccgatctga ctgattgtgttagtaaagagatgaaacagatacaatttcaggtagaggaactgaagtcgtctgatatggtaaccaaaaca gagattttgaatgtcactgacggtattgtctcagtgatagggaatgtatccgaatcaacactacttccaggtgaccttgc tgttgccacggacgctatgacaacggtgtcagaggttgttagaaacgccacagatcatcctgtaggattagaggagattg caaagggatatggagctgctttagatgaaatagttgatccgttgacggagcaaatatggcgtcaaacagaattcgattac accgaaaacaaaatgaagatgttaatatcttcagttgaaaagctttcatcgaatgtagctgagaagagagaagagtttct acgaagacgcagaagagaggctcaacagtactctgtggctgatgcaattaacgttgaatctagaaatatagattttcata tcaattttcgtgaaagaattgccttatgtgaggaatcatcggattttaacgttggagataacaatagtattacactaact tcctcagtatttgcaaaagccgtgaggaattccgaagcacggtacctacccatctacacagggaattttaagtccatacc attcctgttaagggcaagtcaagacgaacaaaataaatatcttgcacgaatgatttacattcaattttctatagtcaccc agctaaacttcaagatgtctttctttgacatcatccatgatagtaaacatgatgtgattgaagcatgggaaagaagtcat tccatttggtctgagaatgatacgaaatcgactacagtattcaactctgacatagtatcagctagcattctcagtgtgcc tgagggaagtattgtcagactaacaaaaccagttaccatcgttttcaaagtttcggtacagaatgcgtacgagagaagat cattacgtaagagtcgttccagtttggcctccacttttaataaaaggaaagatttgatcaatgacctcagctcatcgatg aacacattgataaccgagacgtcctctacatgtacaacccggaaatcgtcaccagcatcgagagcgcatgaccggatcca cagagactctgctctgtatgacaaacttggaatgacacgtgataaagttaatgacaatcccctgggtaggacttatagtg acaaccctattggtggtcggtcctacaatgacagtcccttgggtaggtcctatagcgatggtatcccatattggagaagg aaaaatacttacaatcagaatgcgaggggacatatcgaggacgggtacgccgagccacctgacattctcagaaatgacta cttctttgacgaccagcaagacgtttcgtatgtaattccttatggtagatatgttcaaaacaacaacaacgacgatacag atttcacaggaaagaaaactactgaagatatttatagcaagccagtcaaacgcaaaagttcttctttgccgcgttcggtt ggtcaaagttcaaatcatgtacatttccttgaccaaagcgatgttgttggtcctccattggctgataatctacaacgaaa gcagacaagttctaatttacatatgaacgaggagagaaagaactttacaaagagttttctcgaggaacttcaagaaaaag ctgctcaaattggtataaaggacactgatgaacatatgaaaaaatataatatttttggatttttttctgtaaaaaatgac atgaattcctttggaaaatttataaaacagaaatatcaacggcgaaatgatagcagtatggctaatcttcagattttcca aatcaatgggaaaaaatctttcatttttgaaaacaagaggaaagtattcggtgggtacttgttaaagtgtcttctttact ttaatttcagcctgatagacctcactatggcagagtccgactgttcaatgtctagtaccaatgcacaactaacagcaatg agccaatcagaggcagttattaaagacatctctcctattgtttcaagtgatatcagcagctctgattcggatccctcctc actggaaaacacattaacgagccttacgccggacccagattatatgctttcacaaggcgaatataaagtggagtctggta cacagtcagaagtgtggaggaatgaatcatcacaaaccgaatcgtcttcatgtacagccggccaatcagaggactcagat ttatcaccacagaaacggagaaaacggatatcggaacttcaaggtccggattggtataagcacaaatgttttgatcgtta ttggaagcactataaacaagcaatgacgtggtgtcagagacatttcagcatcatgaaatcaatgagggaaaaacagatga gaaaggcagcctcaactttctatcctccgtacaattgttatatgcccggtgtatttcatatccccgaccaaagttcctca aatactatgagggggaggggaaggggtgtggtcaggggaagaggagttgggagggggaggacagcacattctggtaggag gaatttaccaaaagtaggcaaaactctgaagcaaaagcaagacgtaagcaggagaaatgacgaaacgcagaaagtggaag acactaatacggcacacacggaggacgactcgttagaaatggaaatcacagatgagatgctccagttctttgctcattca gagaaacacagaaaagagagagatgcctcaaaagacgtaacagaagaaggtgtggaaataaaaagagtcaatatagagac agtggttgcagatgagaagtcaaaaatgcccttggcggccatgtttgttgaccgatcaaaaatgttaaaagttgatgacg gacaagcttcgctcagaagggcttcatatcgtttcgttcggttaagaacggatcgcgaagtattgctgcggtttttcaat gatcgcaacggttatgaaatttctatctag |
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Protein
| Protein ID | pfu_aug1.0_3709.1_44738.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3709.1_44738.t1 MFNLASILRNRKRIVFDIHLLSTRLFVTLLFDSVVTRRCVLVDGIPEWERPDLTDCVSKEMKQIQFQVEELKSSDMVTKT EILNVTDGIVSVIGNVSESTLLPGDLAVATDAMTTVSEVVRNATDHPVGLEEIAKGYGAALDEIVDPLTEQIWRQTEFDY TENKMKMLISSVEKLSSNVAEKREEFLRRRRREAQQYSVADAINVESRNIDFHINFRERIALCEESSDFNVGDNNSITLT SSVFAKAVRNSEARYLPIYTGNFKSIPFLLRASQDEQNKYLARMIYIQFSIVTQLNFKMSFFDIIHDSKHDVIEAWERSH SIWSENDTKSTTVFNSDIVSASILSVPEGSIVRLTKPVTIVFKVSVQNAYERRSLRKSRSSLASTFNKRKDLINDLSSSM NTLITETSSTCTTRKSSPASRAHDRIHRDSALYDKLGMTRDKVNDNPLGRTYSDNPIGGRSYNDSPLGRSYSDGIPYWRR KNTYNQNARGHIEDGYAEPPDILRNDYFFDDQQDVSYVIPYGRYVQNNNNDDTDFTGKKTTEDIYSKPVKRKSSSLPRSV GQSSNHVHFLDQSDVVGPPLADNLQRKQTSSNLHMNEERKNFTKSFLEELQEKAAQIGIKDTDEHMKKYNIFGFFSVKND MNSFGKFIKQKYQRRNDSSMANLQIFQINGKKSFIFENKRKVFGGYLLKCLLYFNFSLIDLTMAESDCSMSSTNAQLTAM SQSEAVIKDISPIVSSDISSSDSDPSSLENTLTSLTPDPDYMLSQGEYKVESGTQSEVWRNESSQTESSSCTAGQSEDSD LSPQKRRKRISELQGPDWYKHKCFDRYWKHYKQAMTWCQRHFSIMKSMREKQMRKAASTFYPPYNCYMPGVFHIPDQSSS NTMRGRGRGVVRGRGVGRGRTAHSGRRNLPKVGKTLKQKQDVSRRNDETQKVEDTNTAHTEDDSLEMEITDEMLQFFAHS EKHRKERDASKDVTEEGVEIKRVNIETVVADEKSKMPLAAMFVDRSKMLKVDDGQASLRRASYRFVRLRTDREVLLRFFN DRNGYEISI |
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