Gene
| Gene Model ID | pfu_aug1.0_371.1_07491 |
|---|---|
| Locus | scaffold371.1 : 21036 ... 46766 : + |
| To GenomeBrowser | scaffold371.1:21036..46766 |
| Genes list of scaffold | scaffold371.1 |
| Synonym | pfu_aug2.0_3240.1_02362 |
Manual annotation
| Study field | other |
|---|---|
| Gene name | hypothetical protein |
| Description | similar to XP_002738323.1| PREDICTED: zonadhesin-like [Saccoglossus kowalevskii |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_371.1_07491.t1 | 1 | 1 | Vitellogenin_N | 20 | 127 | 2.1e-20 | 72.5 | 1.2e-23 | 4.5e-20 | 71.4 |
| pfu_aug1.0_371.1_07491.t1 | 3 | 1 | DUF1943 | 160 | 255 | 1.0e-29 | 103.3 | 5.2e-33 | 1.9e-29 | 102.4 |
| pfu_aug1.0_371.1_07491.t1 | 3 | 2 | DUF1943 | 611 | 698 | 1.0e-29 | 103.3 | 0.13 | 480.0 | -0.7 |
| pfu_aug1.0_371.1_07491.t1 | 3 | 3 | DUF1943 | 815 | 855 | 1.0e-29 | 103.3 | 0.88 | 3300.0 | -3.4 |
| pfu_aug1.0_371.1_07491.t1 | 1 | 1 | 7tm_1 | 1504 | 1609 | 2.3e-07 | 30.2 | 1.1e-10 | 4.0e-07 | 29.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_371.1_07491.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_371.1_07491.t1 atgaaaatgtcatccaaagtgaaactagaggttctctctaaatgtgatctggtccttcaagtcgtagtgaccctgcgggc tcttggcaatgctggttatatttcaaatgtgcttccaaccatcaactcctgtttaacaaggaaagagaacccaatggagg tgcgaatagcagcagccgagtccttccgaagagcttcatgcgatactgataaaagtgatatagagggtattttcaaaaac gtagaggaggattcagaactaagaatcgctgcatacttggctctaatggaatgcccatccgatgcagttctgagaactgt aaaaatcacccttgaaaacgaggaagtcaaccaagtgggctcctttgtatggtcacatcttaccaacctcatggaaacat caaatccactgaagcaagaagtacgatcaatcattgaggacgaaacactcaagaaggaattcgaccttgacaaaagaaag ttctctagaaactatgaatggtctttcttcttagataaactgaacacaggcgcatcggtagaaagtaacatgatctggtc atcaaaatcattcattcctagatcattaatggcaaacctaactgtggatctctttggccagtccatcaatcttcttgaag taggcggcagaatcgaaggattggagtatttccttgagacttactttggtccaaatggatatttcgccgagaagacagta aaggaagccacaaagcaagttgtcaaaggcattgactcgagaaagatgaacaaacttgatctacagagagtaagtggcgt tgtgctattagatgagaaaaaagagttcaaagcatcagcagaaatggctcgatctcgcaaaggaaactctttcttctata ctccatctttggaaataaaagccgataaaatgaagccgatcggtctgaaaggaagcatcgaatataggccctcacagtca tttgaatcagagattaccttgtctggtgtgacaaaatctcctgttgtcactaaattgtcactgatgaacaaaaaggtgat tgtatcaatgaaggcgtcattgagtgtagaaaagaagaaggagtatgtgtttgaatcacggcttcaaacatccaaaacaa agaaggctgtgaagtacagacctttcctttccattcgaagtccaacaaaagaatacgtagcttttggcggttctgctgag tacaaacaagggaaagctttggtcgttgacttaactttagatcaaataacaacaaagccaatgaaattctttgtgagaat cagaaatgctgccacaaagaaaagttcaagatatcaagggaaagtagatatccgcaccccaatttttaccacaaagatgc aatccaacttcgtgatgcggggtacaaaggctgtaattgttcgttctacgatcgactacgtcgtaccacgtgttgtccgg gacagagtcagactcaacggaaagataaacatggccagtacgaagagtatgaaagctgtcaaaggaactatttcactacg tccagttctaaaggatttgaatggttacatcaaaatgaaaacacatttccaggaggtaccttttatcggagcagcaatta gacacaacggagatttgaaagcatttgttagtcatggagagatagaatatgctagtggaaagaagatggaagcagacgtt tcatttacaaatgctgacaaaattgacggatcggtaactttaaggactccattttctagcgacttgacggcgagaataaa ccacgaaggagatatttcagcttgtaaaacatcaggttttctacagtatagtagatcaaaacaaatcgacattagaacga catttaaaaaccgtgctaatctagagggcaccctgatgataaaatctccttttacagaggacatttcagcttcagtaaat tctggaaaacaagtagggttggttgatgttcatattgaaggtaaatatggattgactaagaaatatgaaggtgatatgaa atactctaatacagacaaattccaaagctcgttagaactgaaatcgccacaccatgacgatattatcattaaggtggaac attccggacaaatgtcaagatttagctgtcacgctgaaggacaatatggcaaacaaaagaaatatgagggtgatctgtct cattctttcgatggcaaccttctcacttttgcctcttttaaatcaccacaccacagtgacataagtggaaagatagaaca tactggaaattataaacaattcagctcccacgttgagacacagtatggtaatgacaaatacgaaggagatgtaactttca acaacgccaaaaagtttgatgttgctgtgatccttaagtcaccaggtcgtaaggacatgtcagtagcattctctcatgag ggatccctaaagaaatttaggacgagcagtagtctgaatctgacaccgaaggcaaaattcaatattgacgtactcttttc caatgcaaagaaaacatttggatccttcactctgaaatcaccaatgttgccgaaaatagacgctcagttaaaacataaag tggaggcgaaatcatcatctcttgctacaactaaagcatcccttcaatggcaatatgtatctccatccaacatcaacggg atagcaacattcacaagaggttccgaaatcacgaagctgatcgtgaataaccgtgaaaatggaaatgaaattacctcaca tgttcagggaagttggttaaatgacaaatcagtgacattcgatggaacttggagtctaactgaaacgtggaacggactta caggtcatggcggagtagctctctcaacgccgttctcatatctaaaatctttctcttccaaagttagcttcgagaaatct tcaacacaacaaaaacactcaatgtctacagagttcaacgggaataaaatcgttgatattgaaactcttctcagttatgg agataaatatgcaatggaaattactctgcgagagccaacacaactgaaaatagattctgagctgacaattcttccatcca gaaaaagcacgtcagtcatgcttaactgggacacaagtagagacgacaaacaagtgaaaatggaaggagagtactcaact gaaagaggaaatacagaactcaaagtcaaagtatcaaacacagaaaaatcagttgcactgaaaggttcattccaaaatcc atctgccaaactaatcagtacaatggacatcttagttgatgacaagagcatctttggatatgactatgaatgcaaaaatg aacgcagcagacgcaatttgaatctcagcaataagttgaagctacgtcttcctagtagaagtttggaggttgcaggtgga tacagtaaccgttatggtactaaatcactggaaggtgcatttgcatgggattctgacagggacaactcaaagaaaattgg attcaaatccagtctaacaccgagaggtcaagctacatcagcggctgtctcagtagagatgcccagtatcggacaggatg tcaagcttgattcagagatgatgattaacagtggaagtgtaatctttgatggtaagacagaattcaagtactcaaaggat acaacaaagacattggtcatcaaatcccgattggaggatatatcatacggagacaataaaaattacacccttacctttgg attacaacattcttacactaatgttgatgttcaagtagcctcacatgtaggacaaaccgatggacgatattctacaggag ttgatatcaaatacctgacagccaaacgtcaaaccaaaaattttgctctcatggctgaaatcgacagtttgaagaaacaa atgaatatgatggctactgatgcctataaattctgggaagtacaggagaacatcaaggctgttttggacaatatctacga aatggcggttgaagaagttaaagaggagataaacgggttaaagaatgtcattactcatttgaagaactcaaaattcaccg tatatgatccagcaaatggagaaattcaaatggattcttatttgccagttggaatgcctaatctgaaaaccttaccatca atctccgtcagtaaacaaatgaaccacattgccagctatatcccaaactttaacaggtttccagcagtaaaagatctcat ccccgatacagatgttcgcaactggattccaccatttaaaggagttgctgtgctagccggtgaacatatcaccactttcg atggaaaagagattgacatcaatggcggaaagtgttcatacattcttacccgtgactacctcgatggaaatttctcaata attgccaactatgtaggaaaagggcagaagaaacttgtgataactacagcaacccaaaacattcagattgctccaaatgg aaagcttcgtgttgacggaaagactgtaaaaccatcatatcaatcagccgagtatggctcattccatggatcacctgcac atagttataaccaaaaaccacgtgtaccctcgcggactttttgttattttgatggggtgaaaggtgagctggctaacatc ttcttcaccacaatccctctgattctgatactatgtatgaacattgtactgtactgtctcacccttcatcgcatcaacac ggaagaagaacttctaaaggaatcactcggcaatggcagagtcaacagatcccataaggccgccagaaacatgtctatgt ttgtggtagccttcttcgtgcagtggtgtcccctcacggtgtatggactttggcagctgattgcccccgtaccacagctt ctgtttcagatggtaaccacgttctctaatatcggcgggattcttaacgggatagtgttcatcatcctgaaaaggcgcaa gctaatgtcacacaaggaagggaaggaatcatcctctgtacacatgaaagacatttctattaacttagataacactgtaa aggacaatgcggatactggtcagagatcggaaaagtga |
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Protein
| Protein ID | pfu_aug1.0_371.1_07491.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_371.1_07491.t1 MKMSSKVKLEVLSKCDLVLQVVVTLRALGNAGYISNVLPTINSCLTRKENPMEVRIAAAESFRRASCDTDKSDIEGIFKN VEEDSELRIAAYLALMECPSDAVLRTVKITLENEEVNQVGSFVWSHLTNLMETSNPLKQEVRSIIEDETLKKEFDLDKRK FSRNYEWSFFLDKLNTGASVESNMIWSSKSFIPRSLMANLTVDLFGQSINLLEVGGRIEGLEYFLETYFGPNGYFAEKTV KEATKQVVKGIDSRKMNKLDLQRVSGVVLLDEKKEFKASAEMARSRKGNSFFYTPSLEIKADKMKPIGLKGSIEYRPSQS FESEITLSGVTKSPVVTKLSLMNKKVIVSMKASLSVEKKKEYVFESRLQTSKTKKAVKYRPFLSIRSPTKEYVAFGGSAE YKQGKALVVDLTLDQITTKPMKFFVRIRNAATKKSSRYQGKVDIRTPIFTTKMQSNFVMRGTKAVIVRSTIDYVVPRVVR DRVRLNGKINMASTKSMKAVKGTISLRPVLKDLNGYIKMKTHFQEVPFIGAAIRHNGDLKAFVSHGEIEYASGKKMEADV SFTNADKIDGSVTLRTPFSSDLTARINHEGDISACKTSGFLQYSRSKQIDIRTTFKNRANLEGTLMIKSPFTEDISASVN SGKQVGLVDVHIEGKYGLTKKYEGDMKYSNTDKFQSSLELKSPHHDDIIIKVEHSGQMSRFSCHAEGQYGKQKKYEGDLS HSFDGNLLTFASFKSPHHSDISGKIEHTGNYKQFSSHVETQYGNDKYEGDVTFNNAKKFDVAVILKSPGRKDMSVAFSHE GSLKKFRTSSSLNLTPKAKFNIDVLFSNAKKTFGSFTLKSPMLPKIDAQLKHKVEAKSSSLATTKASLQWQYVSPSNING IATFTRGSEITKLIVNNRENGNEITSHVQGSWLNDKSVTFDGTWSLTETWNGLTGHGGVALSTPFSYLKSFSSKVSFEKS STQQKHSMSTEFNGNKIVDIETLLSYGDKYAMEITLREPTQLKIDSELTILPSRKSTSVMLNWDTSRDDKQVKMEGEYST ERGNTELKVKVSNTEKSVALKGSFQNPSAKLISTMDILVDDKSIFGYDYECKNERSRRNLNLSNKLKLRLPSRSLEVAGG YSNRYGTKSLEGAFAWDSDRDNSKKIGFKSSLTPRGQATSAAVSVEMPSIGQDVKLDSEMMINSGSVIFDGKTEFKYSKD TTKTLVIKSRLEDISYGDNKNYTLTFGLQHSYTNVDVQVASHVGQTDGRYSTGVDIKYLTAKRQTKNFALMAEIDSLKKQ MNMMATDAYKFWEVQENIKAVLDNIYEMAVEEVKEEINGLKNVITHLKNSKFTVYDPANGEIQMDSYLPVGMPNLKTLPS ISVSKQMNHIASYIPNFNRFPAVKDLIPDTDVRNWIPPFKGVAVLAGEHITTFDGKEIDINGGKCSYILTRDYLDGNFSI IANYVGKGQKKLVITTATQNIQIAPNGKLRVDGKTVKPSYQSAEYGSFHGSPAHSYNQKPRVPSRTFCYFDGVKGELANI FFTTIPLILILCMNIVLYCLTLHRINTEEELLKESLGNGRVNRSHKAARNMSMFVVAFFVQWCPLTVYGLWQLIAPVPQL LFQMVTTFSNIGGILNGIVFIILKRRKLMSHKEGKESSSVHMKDISINLDNTVKDNADTGQRSEK |
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