Gene
| Gene Model ID | pfu_aug1.0_37105.1_70220 |
|---|---|
| Locus | scaffold37105.1 : 1 ... 4235 : - |
| To GenomeBrowser | scaffold37105.1:1..4235 |
| Genes list of scaffold | scaffold37105.1 |
| Synonym | pfu_aug2.0_237.1_23715 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_37105.1_70220.t1 | 1 | 1 | Secretogranin_V | 74 | 197 | 3.20001e-41 | 141.0 | 2.8026e-45 | 3.80004e-41 | 140.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_37105.1_70220.t1 | gi|325296779|ref|NP_001191628.1| | 7B2 precursor [Aplysia californica] | 2.0e-34 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 2 |
| maleGonad | 2 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_37105.1_70220.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_37105.1_70220.t1 atggccccattctctgtgtttctgttcgcctccctcggatatgtatacgggtacgacatggggggtctaggaggtgcctc ttacgatgccatgtggaaggaccttgacctcgctgatctctaccgtcaactagacaaaggtcgtatggatggttactatg acgatgaccttgacagtcggagttcgcccagcaatgattggacgttattgagctatagagaccagccaatgagtgatcct aatgatatattcagcgaggcttccataagagatcaagaatatcaggagcacagccctctttggggataccaatccgtgtc tggtggaaccggggacggcaaagaacaccctaaagaagtaaagacagataaagtactgcctgcctattgtaaccctccta atccatgtcccatcggatacacagaagaagacaactgtttgaccagctttgagaataccccacagaacaatgtccggttg atgaaagagcaagattgtccgtgtgacacggaacacatgatcgacaactgtggagccaaaaataaagtggacacaaaatc tgacgacagcgccaacaagctcatggacgaacttaacctagtaagtataaactaa |
|
Protein
| Protein ID | pfu_aug1.0_37105.1_70220.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_37105.1_70220.t1 MAPFSVFLFASLGYVYGYDMGGLGGASYDAMWKDLDLADLYRQLDKGRMDGYYDDDLDSRSSPSNDWTLLSYRDQPMSDP NDIFSEASIRDQEYQEHSPLWGYQSVSGGTGDGKEHPKEVKTDKVLPAYCNPPNPCPIGYTEEDNCLTSFENTPQNNVRL MKEQDCPCDTEHMIDNCGAKNKVDTKSDDSANKLMDELNLVSIN |
|