Gene
| Gene Model ID | pfu_aug1.0_37105.1_70221 |
|---|---|
| Locus | scaffold37105.1 : 8376 ... 11718 : + |
| To GenomeBrowser | scaffold37105.1:8376..11718 |
| Genes list of scaffold | scaffold37105.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_37105.1_70221.t1 | 2 | 1 | Herpes_alk_exo | 240 | 407 | 9.6e-13 | 47.4 | 8.1e-16 | 2.4e-12 | 46.0 |
| pfu_aug1.0_37105.1_70221.t1 | 1 | 1 | YqaJ | 311 | 466 | 1.1e-21 | 77.4 | 6.2e-25 | 1.8e-21 | 76.6 |
| pfu_aug1.0_37105.1_70221.t1 | 2 | 2 | Herpes_alk_exo | 451 | 464 | 9.6e-13 | 47.4 | 0.47 | 1400.0 | -2.6 |
| pfu_aug1.0_37105.1_70221.t1 | 1 | 1 | PHD | 539 | 582 | 3.5e-07 | 29.8 | 1.2e-10 | 3.5e-07 | 29.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_37105.1_70221.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_37105.1_70221.t1 atgtctatttcacctaatatatattcatcctacgtcaataatttaccttccgatgcaaagcagaggtattataagaaact ccagtacaacaatggaacgttggaactacctgatccgtacaatttatctactgattggcttgacagtccagctacctggc cagatctcacgttcggtgacatattcatctacctgattgacacgccgtctatttacaccagggaaacgatgaaggcttac aagtccctagatgcataccagtatgttgtcagtggtcatgtacagactgtgatgtcccatgccatttcaaatgactctcc cttcattgcattgaagaccaaggtgaccccttctcaacgagctagggacaaaccacacgaaccatgggtgtacctctcca aaacaacaggctctgtttactgtgcacactgtacttgtatggcaggattaggtgaagtatgcagccatgtagcagcctta ttgtttaaagtagaaatgggtgtgaagatggggcttacagcaaccagttcaactagcagggcatgtcagtggaattcagc atttcgcaaagaggttataccagcaactgtagtagaaatctgccaacaaattaagggcaagagaattaaagaccttgaca ccgtgcaagcaacaggttccgtccccatgccagctgacgatgttttgaaagaactttactcgttagtaccacatgcagcc ttttttacaacaattgcacctatggtcgatgccactccgacatttagttccattgcagaccgctttccacagttacttac agaggccaagagtgacagtgttttgaatttaaatgaagagtgcactaacttcatgaattcttataggattactgatgaac agtcgaacaaccttgagcgagctacccgtgaccagtcaatcagtacactatggtaccaacatcgtaatggccgcataaca gcatcaaaggctcatgatgtgaggactatgaggccatcgacttcaccgcaaaacttagttaaacgtgtgatgggatacaa ctcttatgacttatcgaaaaaggatgctgtgaaatggggtctagaccatgaaggcgagtgtaggaacattttcaaatcgt acatgcaaacatcacatactgagtttgagtgtcggctaagcggatttagaatccacaaggatcatcctttcttaggagcc agtcctgacggaatcacaacatgcaaatgttgtggaactggaactttggaaattaagtgtccctttaagcacaggaatgt gacagtgtcagaagctgcatcaagtgatagtgacttttgcctggatgcatcattaaaactgaaaactagccacagatact atacacaagtacagtttcagatgtttattgcggacgttaaccactgtgactttgttgtatttacaaaatgtgagccacct agtatggttatcattcgaatcaccagagacaacgacttctgttcacagcttgtgtcaaagtgcaacacattcgtcaagga ccacattgtgcgtgagttgattacaaaggaacttgaaaatgaaccaatctgttctgttgtttccgatataaacaacaatg aacccgaaacatggtgcttgtgtggacagccagagtatggccgcatgattagatgtgacaatgaggaatgttcttttaca tggttccactacagatgtgtaaacataaagaggaagcccaggggacagtggctatgtgacagctgtgcatag |
|
Protein
| Protein ID | pfu_aug1.0_37105.1_70221.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_37105.1_70221.t1 MSISPNIYSSYVNNLPSDAKQRYYKKLQYNNGTLELPDPYNLSTDWLDSPATWPDLTFGDIFIYLIDTPSIYTRETMKAY KSLDAYQYVVSGHVQTVMSHAISNDSPFIALKTKVTPSQRARDKPHEPWVYLSKTTGSVYCAHCTCMAGLGEVCSHVAAL LFKVEMGVKMGLTATSSTSRACQWNSAFRKEVIPATVVEICQQIKGKRIKDLDTVQATGSVPMPADDVLKELYSLVPHAA FFTTIAPMVDATPTFSSIADRFPQLLTEAKSDSVLNLNEECTNFMNSYRITDEQSNNLERATRDQSISTLWYQHRNGRIT ASKAHDVRTMRPSTSPQNLVKRVMGYNSYDLSKKDAVKWGLDHEGECRNIFKSYMQTSHTEFECRLSGFRIHKDHPFLGA SPDGITTCKCCGTGTLEIKCPFKHRNVTVSEAASSDSDFCLDASLKLKTSHRYYTQVQFQMFIADVNHCDFVVFTKCEPP SMVIIRITRDNDFCSQLVSKCNTFVKDHIVRELITKELENEPICSVVSDINNNEPETWCLCGQPEYGRMIRCDNEECSFT WFHYRCVNIKRKPRGQWLCDSCA |
|