Gene
| Gene Model ID | pfu_aug1.0_37105.1_70222 |
|---|---|
| Locus | scaffold37105.1 : 11720 ... 14699 : - |
| To GenomeBrowser | scaffold37105.1:11720..14699 |
| Genes list of scaffold | scaffold37105.1 |
| Synonym | pfu_aug2.0_237.1_23717 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_37105.1_70222.t1 | 1 | 1 | HTH_Tnp_4 | 156 | 199 | 5.2e-13 | 48.3 | 1.1e-15 | 9.9e-13 | 47.4 |
| pfu_aug1.0_37105.1_70222.t1 | 1 | 1 | DDE_Tnp_4 | 236 | 395 | 1.82169e-44 | 151.1 | 0.0 | 4.34403e-44 | 149.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_37105.1_70222.t1 | gi|340383997|ref|XP_003390502.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 2 |
Transcript
| Transcript ID | pfu_aug1.0_37105.1_70222.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_37105.1_70222.t1 gcacaaagagtaatgacaagaacaacgttgattacgtcccttctgtcaaccttggctacgacaacagcaaaacagatgac aaccaacgaatttccagagaacaacgacgacttcatagagaacaaaccaaggacaaactggagactgcgcaatctcttct tgctcttcaaagttcagtgtccgagtttgatttcaagaaacccactgtgcaagaatcaccgactgatatccatgacaagt gtattagtgctatgaaaaatcttcaagaggaaaattctaagctcaacaccgagttaatgcgactacaagaagaaaacact acgctcaagaaagaacttagcaacttgcgtttttccgagaacttcattgcgacagaccagaaaaccgcattctacactgg tgttgcctcccatgatctatttatttggttagtgacatactgcgcagcgttgttgccacacttcaactctttgtcaccgc ggtcagtgcttctttgtattttgatgaaacttagactaaaccttcagcatcaagatattgcgtacagattcaacgtgtca gtttctactgtgtcggaaattatgaaccagtgcataccaaaggtagcttcaaaactagcgtttctagttcagtggccgtc aagagacaatcttttgctacatatgcctcctatatttagacagttgtatccgaaatgtgttagcatcattgactgctttg aagtgtttattcaacgccccggacatcttacaacaagagcgcaaacttggtccaactataagcaccacaacacaattaag tttttagtttcgattactccaaccggtgccatttcctttctttcaagagcttttggtggtagagtgtctgacaaagtcat tacacaacgtagtggttacctagatatgttagaatatggggacttaattttagccgatagaggatttcttattgctgagg atgtttctgcccatcacgctacgctagtgataccagcatttacaaaagggaaagctcagttaagtgcacgtgacattgaa catacccgcaagattgccagggtgcgaattcacgttgaacgtgccattgaacgcatgaagaactttagagtgttaagttc cactatgagtatgcacctagtgccacatgctgacaacatagcaacaatttgtgcagccatatgtaatcttcagtcaaagc ttgtatcataa |
|
Protein
| Protein ID | pfu_aug1.0_37105.1_70222.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_37105.1_70222.t1 TKSNDKNNVDYVPSVNLGYDNSKTDDNQRISREQRRLHREQTKDKLETAQSLLALQSSVSEFDFKKPTVQESPTDIHDKC ISAMKNLQEENSKLNTELMRLQEENTTLKKELSNLRFSENFIATDQKTAFYTGVASHDLFIWLVTYCAALLPHFNSLSPR SVLLCILMKLRLNLQHQDIAYRFNVSVSTVSEIMNQCIPKVASKLAFLVQWPSRDNLLLHMPPIFRQLYPKCVSIIDCFE VFIQRPGHLTTRAQTWSNYKHHNTIKFLVSITPTGAISFLSRAFGGRVSDKVITQRSGYLDMLEYGDLILADRGFLIAED VSAHHATLVIPAFTKGKAQLSARDIEHTRKIARVRIHVERAIERMKNFRVLSSTMSMHLVPHADNIATICAAICNLQSKL VS |
|