Gene
| Gene Model ID | pfu_aug1.0_3716.1_16154 |
|---|---|
| Locus | scaffold3716.1 : 1 ... 18535 : - |
| To GenomeBrowser | scaffold3716.1:1..18535 |
| Genes list of scaffold | scaffold3716.1 |
| Synonym | pfu_aug2.0_282.1_07286 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3716.1_16154.t1 | 1 | 1 | TFIIH_BTF_p62_N | 10 | 81 | 6.0e-17 | 61.0 | 2.5e-20 | 1.2e-16 | 60.0 |
| pfu_aug1.0_3716.1_16154.t1 | 2 | 1 | BSD | 108 | 149 | 6.3e-27 | 93.0 | 4.3e-13 | 2.1e-09 | 36.9 |
| pfu_aug1.0_3716.1_16154.t1 | 2 | 2 | BSD | 179 | 235 | 6.3e-27 | 93.0 | 2.2e-18 | 1.1e-14 | 53.9 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3716.1_16154.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3716.1_16154.t1 atggcctctcgatcagaagaggttttactaattgtgaatcatgtaaggaacaaaaagacagatggcacactgtatttgat gggagaaagactaggatggatgcagggcagtaaaagtactttttctatcagctacctctatgcagatatcaaagcacaaa aaatatcaccagatttcaaagagaaagtacaacttcagctagtgttacatgatggcagtgctaacacgctacactttaac aatccacatggccgtgacgacgccctcaaagatagggaaagtgtcaaagaacttctacaacaactgttacctaagttccg taggaaactcaacagtgaacttgaggaaaaaaacaagatgctacaggagaatccagagttatttcagctgtacaaagact tagttgttagtggagtcatcacagcagaggaattctgggcttctaggaaggcaaccaataccacaaaaccagagactaaa caacagcctgttggtgtatctgcagcattccttgctgatataaagccccagacagacggatgtaatggtttgaagtacaa tctgacagctgatgttatagagtctattttcagaacttatccaatggttaagatgaagcatgctgagtttgtacctcacc agatgaccgaaaatgagttttggactcgatttttccagtctcactattttcatagagacagaacaaatatcagtaataaa gatgtcttctcagaatgtgccaaaaatgatgagaaagagatgagtaatgaggtcagtaccaaggtcactgatcctttact ggaccttactaagataacagactcgacactagatgatggttatggcttaaactcaggtgatagaaaagctagcaataacc aaaccaacttaacgatgatacgtcggtttaatcatcattctactatggttcttaaggcatgcaaaaaagactatggttca caatctgccgaaaatgacggaagtgaaactcataatggacaggcaatggtgaatggaactgttgaaacacagtccaagca taatagtaaaagtgaaacaaaagtcagtaaaacaaatgggcatactaatcataaagtaaatcacgatgatccaaggccga gtactagctctggacattctgatcagcaccatcataaacgaaaaaaaatcatcgaaaaaattcagtatgatgacttagtg aatcaggaagataggggtaaagtgaacttaactctccataaaatggaggggtatttacatggacctacgcctgttaaggt aatgagatacacttcaagtgaggatgtgattaaggccacgcagaaagtaacagaggagatgcagagctggactccagatt tatcaatggtgctgaatgggactaatgcaatacaaactctaggtgaattatcaccaggtggtgctctgatgaaaggaaca agtaaccagcaactaaatcaaatgatccctatagaggttcaagatgcagtgaagtcacaatacaatgctttgttagaatt attacgtcatttctggtcgtgttttcctgtttcgtccaaactcctggaagagaaggcgcaaatctttcgagaacctcttc gcggttcacgagatttgctcttgtcgaaccagaatgccatgaatgcaaaaaataagacactcgttccttaa |
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Protein
| Protein ID | pfu_aug1.0_3716.1_16154.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3716.1_16154.t1 MASRSEEVLLIVNHVRNKKTDGTLYLMGERLGWMQGSKSTFSISYLYADIKAQKISPDFKEKVQLQLVLHDGSANTLHFN NPHGRDDALKDRESVKELLQQLLPKFRRKLNSELEEKNKMLQENPELFQLYKDLVVSGVITAEEFWASRKATNTTKPETK QQPVGVSAAFLADIKPQTDGCNGLKYNLTADVIESIFRTYPMVKMKHAEFVPHQMTENEFWTRFFQSHYFHRDRTNISNK DVFSECAKNDEKEMSNEVSTKVTDPLLDLTKITDSTLDDGYGLNSGDRKASNNQTNLTMIRRFNHHSTMVLKACKKDYGS QSAENDGSETHNGQAMVNGTVETQSKHNSKSETKVSKTNGHTNHKVNHDDPRPSTSSGHSDQHHHKRKKIIEKIQYDDLV NQEDRGKVNLTLHKMEGYLHGPTPVKVMRYTSSEDVIKATQKVTEEMQSWTPDLSMVLNGTNAIQTLGELSPGGALMKGT SNQQLNQMIPIEVQDAVKSQYNALLELLRHFWSCFPVSSKLLEEKAQIFREPLRGSRDLLLSNQNAMNAKNKTLVP |
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