Gene
| Gene Model ID | pfu_aug1.0_3716.1_16155 |
|---|---|
| Locus | scaffold3716.1 : 24826 ... 36267 : + |
| To GenomeBrowser | scaffold3716.1:24826..36267 |
| Genes list of scaffold | scaffold3716.1 |
| Synonym | pfu_aug2.0_282.1_07288 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3716.1_16155.t1 | 1 | 1 | G8 | 40 | 148 | 1.3e-23 | 83.1 | 5.1e-27 | 3.8e-23 | 81.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3716.1_16155.t1 | gi|301612255|ref|XP_002935631.1| | PREDICTED: transmembrane protein 2 [Xenopus (Silurana) tropicalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_3716.1_16155.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3716.1_16155.t1 atgtctttgtcgagaaacatgaggctagcatttgtttgcctgctagttcataccatttgggcccaagatgcatgtccgta caaaaatagcaatcttgcactctggtcagatggaacgtggggcgatgatgccgtgattccagagggatctcatgttttgc tggatgttgatgatgtggacataaagagtattaccatagagaagggggccagcttagtgttcgatgacatcgaagctaca gtgcgtgtaaactacattctggttaaaggaagcctgatattaggatcagagtcatgtccgttgacggctgatatagaaat catactaaaaggggatcccaaggaatacacaatagatggtttcggagaaaagttcattggcgtagaacaaggaggaactc tggaaatacacggggactacaagcttccatggaccaaactagattctacggtcaaacggttagaggatggaatggttgac aaactgaggaatcttccccagttcatagatgacaagaaccatgatagatacaggggtctggctgtctatgttatggaccc gacgaccggacagatcgaggatgaattttccgccaccacgggtatggagatgaaccaatgtctcaccgataaagctgccg aggaatttgaagagaaaatgaacgcacttcccgatggcaagattgtagggattgctctcaagagacgtctcggagaggga agaaacctcgcgatgttttatgaaattctagaaaagctggcgtttggttcggttaccaagatgacgaaaattcgacagta caaattccacagtgcatgggcaatgatatttaaaaaaggcgacccatcaaaaacgcaagaagatatcgtgtttgacgacg gcgtggtcaaggaccgtgcagtggagttatatcttgttgagaatggaatgaagttctccatcagaagctgggtccacacc atacggcgtggagcttgttactcggaggctaaagtcagtcaggccgacatatccatacctactataaaactggtggacga tgtggatacatggaaggaaggagacaacgtcgtacttctgtctacagactttgacatgaagcaagccgaggaggctgttg tagcaccttgctcatcgtgtgcttccaatgagatacaagtcaacattgaaccgaagtttactcactttggtgaaatcgtt cacaatgttgacatgcgaggtgaagtggcagtcctgaatcgtaacatcgttataagaggagaagagtcatcaaaaagcaa tacatttggaggtcatttgaaggtactgagaggctttacagacgtgcacatagaaaatgcagagtttgtcaacatgggtc aacaggaatcaattgggaattacccgatccatttccacatgtgtatggacgtagataattatacaagaccagcttacgtc cgtggaaacagcatccatgacaccaaagccagatgtatcaccgtccatgggaccagcggattactagtcaaggataatgt atgttaccgttctctaggacacggatttttcctggaggatggtggagagaagagaacggtgtttgacgggaatctggggg cattaacaaacaggggcaatctgattgtctctgatcgagtagctccatcaactttctggattacgaaccctaatacctat atgagaaacaacgtagcagcgggttcaatgggaaaatgtttgagttctgtatttttttatttctaa |
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Protein
| Protein ID | pfu_aug1.0_3716.1_16155.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3716.1_16155.t1 MSLSRNMRLAFVCLLVHTIWAQDACPYKNSNLALWSDGTWGDDAVIPEGSHVLLDVDDVDIKSITIEKGASLVFDDIEAT VRVNYILVKGSLILGSESCPLTADIEIILKGDPKEYTIDGFGEKFIGVEQGGTLEIHGDYKLPWTKLDSTVKRLEDGMVD KLRNLPQFIDDKNHDRYRGLAVYVMDPTTGQIEDEFSATTGMEMNQCLTDKAAEEFEEKMNALPDGKIVGIALKRRLGEG RNLAMFYEILEKLAFGSVTKMTKIRQYKFHSAWAMIFKKGDPSKTQEDIVFDDGVVKDRAVELYLVENGMKFSIRSWVHT IRRGACYSEAKVSQADISIPTIKLVDDVDTWKEGDNVVLLSTDFDMKQAEEAVVAPCSSCASNEIQVNIEPKFTHFGEIV HNVDMRGEVAVLNRNIVIRGEESSKSNTFGGHLKVLRGFTDVHIENAEFVNMGQQESIGNYPIHFHMCMDVDNYTRPAYV RGNSIHDTKARCITVHGTSGLLVKDNVCYRSLGHGFFLEDGGEKRTVFDGNLGALTNRGNLIVSDRVAPSTFWITNPNTY MRNNVAAGSMGKCLSSVFFYF |
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