Gene
| Gene Model ID | pfu_aug1.0_3717.1_01522 |
|---|---|
| Locus | scaffold3717.1 : 59780 ... 67065 : - |
| To GenomeBrowser | scaffold3717.1:59780..67065 |
| Genes list of scaffold | scaffold3717.1 |
| Synonym | pfu_aug2.0_133.1_10325 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3717.1_01522.t1 | 2 | 1 | zf-TRAF | 52 | 108 | 1.6e-06 | 28.3 | 1.0e-09 | 7.4e-06 | 26.2 |
| pfu_aug1.0_3717.1_01522.t1 | 2 | 2 | zf-TRAF | 103 | 115 | 1.6e-06 | 28.3 | 0.076 | 570.0 | 1.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3717.1_01522.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3717.1_01522.t1 atgtatactggttttcatgtaaggtacatgttacacaaatacaaattgggaaataaaagtttttcgcaatttatttcctg tcatgaacgtccttatgaatttgtgacggttcgggtatcgtgcctggttagctcagtcggtaaaagagaggaacatgaag aaacctgcgagtttgctccgattgcatgtccgaacatggtgcattgtgggaaatttagatcctctgagatggagcagcat ttacaagtgtgtgcattccacccatgttcacacaaagacaaaggctgtgaatatatgggacgacaagatgatattaagga ccatttgttgtcttgtggatacagaggcctctccaaaagtgtcagcttgtctgacttcaactctcatcaccatacagagc ttgcagaagaagcaggagtccctgcatttacttgtagaacagctaatgacgacgagaaaccgacgatctatggggtctcc aggcagctcggctga |
|
Protein
| Protein ID | pfu_aug1.0_3717.1_01522.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3717.1_01522.t1 MYTGFHVRYMLHKYKLGNKSFSQFISCHERPYEFVTVRVSCLVSSVGKREEHEETCEFAPIACPNMVHCGKFRSSEMEQH LQVCAFHPCSHKDKGCEYMGRQDDIKDHLLSCGYRGLSKSVSLSDFNSHHHTELAEEAGVPAFTCRTANDDEKPTIYGVS RQLG |
|